DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17717 and AT5G62460

DIOPT Version :10

Sequence 1:NP_572327.1 Gene:CG17717 / 31592 FlyBaseID:FBgn0029877 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_001330074.1 Gene:AT5G62460 / 836366 AraportID:AT5G62460 Length:320 Species:Arabidopsis thaliana


Alignment Length:253 Identity:52/253 - (20%)
Similarity:83/253 - (32%) Gaps:98/253 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LESAGNATMPLGAQPPQSAAAEAICSSQIVASAHGTPTASTAALEISSARQRMLRSHLQESLHSA 84
            :||:|           :|:.|:...|.....|..|..|.     |..:..||.:....:..:.|.
plant    41 IESSG-----------ESSRAQGSTSLSTTKSMDGKKTE-----EEETTEQRDVDDEEEPLIQSV 89

  Fly    85 NESGNSCRICRWNRNDMEIIKCPCNCKGSVGYIHLKCLKRWIMHRRDNRCEIC------------ 137
                 .||||: ..:.::.::.||:|.||:.|.|.||::||...:.|..||||            
plant    90 -----ECRICQ-EEDSVKNLESPCSCSGSLKYAHRKCVQRWCNEKGDTTCEICHKSYQPGYTAPP 148

  Fly   138 -----NAVFNIAE-------------------------------ERASLKQMIRTFCCGRCCGLI 166
                 :.:.:|.|                               |.|........||        
plant   149 PPPADDTIIDIGEDWGNGVHLDLNDPRILAMAAAERHFFDADYDEYADSNSSGAAFC-------- 205

  Fly   167 VKHLLFSASLMPLAHIILQQVLQCMDNMNQGSTDQLTVQEVFVASCALLTSSALFFHF 224
                 .||:|:.:|.::|:..|...:|.:....|.               .||.||.|
plant   206 -----RSAALILMALLLLRHALNLTNNNSDDEEDD---------------PSAFFFLF 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17717NP_572327.1 RINGv 91..138 CDD:128983 20/63 (32%)
AT5G62460NP_001330074.1 RINGv 91..137 CDD:128983 19/46 (41%)
DUF3675 142..261 CDD:463576 19/130 (15%)

Return to query results.
Submit another query.