DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17717 and AT3G09760

DIOPT Version :10

Sequence 1:NP_572327.1 Gene:CG17717 / 31592 FlyBaseID:FBgn0029877 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_566355.1 Gene:AT3G09760 / 820134 AraportID:AT3G09760 Length:491 Species:Arabidopsis thaliana


Alignment Length:248 Identity:45/248 - (18%)
Similarity:84/248 - (33%) Gaps:86/248 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 QIVASAHGTPTASTAALEISSARQRMLRSHLQESLHSANESGNSCRICRWN-RNDMEIIKCPCNC 110
            :::.:.:.:||.:|..|..::.          :......|....||||... ..|.|..|..|.|
plant   232 RVIPTPNMSPTRNTIKLNDANV----------DGAEDVPEEEAVCRICLVELGEDSEAFKMECLC 286

  Fly   111 KGSVGYIHLKCLKRWIMHRRDNRCEICN--------AVFNIAEERAS------------------ 149
            :|.:...|.:|..:|...:.:..|::|.        .:..:...|.|                  
plant   287 RGELALAHKECTIKWFTIKGNRTCDVCKQEVQNLPVTLLRMQNSRGSIGAPDAEAAHYSLWQDVP 351

  Fly   150 ---LKQMIRTFCCGRCCGLIVKHLLFSASLMPLAHIILQQVLQCMDNMNQGSTDQLTVQEVFVAS 211
               :..|:..||                        .|:|:|  :..|..|:   :.|...|  |
plant   352 ILVIVSMLAYFC------------------------FLEQLL--LTKMQSGA---IAVSLPF--S 385

  Fly   212 CAL-----LTSSALF--FHFFEFVTTRFMLIRNILSHWWMFGSTSDFELVEIE 257
            |.|     :|::.:.  .:.:.:.||:|.|:        :|.|...|.||.::
plant   386 CVLGLFASMTATTMVPKRYVWIYATTQFGLV--------VFFSHIFFTLVRMQ 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17717NP_572327.1 RINGv 91..138 CDD:128983 14/47 (30%)
AT3G09760NP_566355.1 RINGv 265..314 CDD:128983 14/48 (29%)

Return to query results.
Submit another query.