DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG17717 and Marchf1

DIOPT Version :9

Sequence 1:	NP_572327.1	Gene:	CG17717 / 31592	FlyBaseID:	FBgn0029877	Length:	266	Species:	Drosophila melanogaster
Sequence 2:	XP_006509817.1	Gene:	Marchf1 / 72925	MGIID:	1920175	Length:	453	Species:	Mus musculus

Alignment Length:	168	Identity:	31/168 - (18%)
Similarity:	73/168 - (43%)	Gaps:	25/168 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly    40 AEAICSSQIVASAHGTPTASTAALEISSARQRMLRSHLQESLHSANESGNSCRICRWNRNDMEII 104
            :|...:::|:|:...........|:::::.|:...::     ...:::...||||....::...:
Mouse   198 SETDFNTEILAAVERDECGEDTGLQLNTSTQKPPAAY-----DDGSDNFEVCRICHCEGDEESPL 257

  Fly   105 KCPCNCKGSVGYIHLKCLKRWIMHRRDNRCEICNAVFNIAEERASLK-----QMI-----RTFCC 159
            ..||.|.|::.::|..||.:||.......||:|...|.:..:...|:     ||.     :.||.
Mouse   258 ITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDFIMETKLKPLRKWEKLQMTTSERRKIFCS 322

  Fly   160 GRCCGLIVKHLLFSASLMPLAHIIL----QQVLQCMDN 193
                  :..|::....::...::::    :::.|..||
Mouse   323 ------VTFHVIAVTCVVWSLYVLIDRTAEEIKQGNDN 354

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG17717	NP_572327.1	RINGv	91..138	CDD:128983	15/46 (33%)
Marchf1	XP_006509817.1	RING_CH-C4HC3_MARCH1_like	243..294	CDD:319612	16/50 (32%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5183
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R328
SonicParanoid	1	1.000	-	-		X270
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.840