DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17717 and Marchf8

DIOPT Version :9

Sequence 1:NP_572327.1 Gene:CG17717 / 31592 FlyBaseID:FBgn0029877 Length:266 Species:Drosophila melanogaster
Sequence 2:XP_006506702.1 Gene:Marchf8 / 71779 MGIID:1919029 Length:568 Species:Mus musculus


Alignment Length:151 Identity:38/151 - (25%)
Similarity:63/151 - (41%) Gaps:25/151 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SEAAALRLINGLESAGNATMPLGAQPPQSAAAEAICSSQIVASAHGTPTASTAALEISSARQRML 73
            |.|::|...:.|||.. :.:.........|.:...||.::........|:|      :..:.|:|
Mouse   265 SSASSLHRFHELESHA-SHLHTAKSSSWLAGSMDFCSDEMGDDDVFEDTSS------AKLKNRVL 322

  Fly    74 R---------------SHLQES---LHSANESGNSCRICRWNRNDMEIIKCPCNCKGSVGYIHLK 120
            |               |.|.|.   :...:.||::||||....:|...:..||:|.||:.::|..
Mouse   323 RAPLCSVEKDSDLDCPSLLSEKCTPISPVSTSGDACRICHCEGDDESPLITPCHCTGSLHFVHQA 387

  Fly   121 CLKRWIMHRRDNRCEICNAVF 141
            ||::||.......||:|...|
Mouse   388 CLQQWIKSSDTRCCELCKYEF 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17717NP_572327.1 RINGv 91..138 CDD:128983 17/46 (37%)
Marchf8XP_006506702.1 RING_CH-C4HC3_MARCH1_like 357..408 CDD:319612 18/50 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R328
SonicParanoid 1 1.000 - - X270
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

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