DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17717 and marc-1

DIOPT Version :10

Sequence 1:NP_572327.1 Gene:CG17717 / 31592 FlyBaseID:FBgn0029877 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_001122964.1 Gene:marc-1 / 6418739 WormBaseID:WBGene00077696 Length:206 Species:Caenorhabditis elegans


Alignment Length:208 Identity:47/208 - (22%)
Similarity:96/208 - (46%) Gaps:19/208 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 SSQIVASAHGTPTASTAALEISSARQRMLRSHLQESLHSANESGNS--CRICRWNRNDMEIIKCP 107
            ::.|.::.....:.|.|:.::.|..:.:..:.|..|...:..||:.  ||||:.:..||  :: |
 Worm     4 TTSINSAISSNSSLSLASTQVQSPEKPVRPAWLLASFSESTTSGSRRICRICQMHEGDM--VR-P 65

  Fly   108 CNCKGSVGYIHLKCLKRWIMHRRDNRCEICNAVF-NIAEERASLKQMIRTFCCGRCCGLIVKHLL 171
            |:|.|::|.:|.:||.:|:.......||||.:.: |...:...:||..:.    :|....:.|:|
 Worm    66 CDCAGTMGDVHEECLTKWVNMSNKKTCEICKSEYTNSGAQFKPIKQWSKP----KCSLNNIFHVL 126

  Fly   172 FSASL-MPLAHIILQQVLQCM------DNMNQGSTDQLTVQEVFVASCALLTS-SALFFHFFEFV 228
            ....| :.::::::....:|.      .||.....|...:..:.:.|.|:|.: ..|...|..::
 Worm   127 IIVLLGLLISYVVIVMEERCFYKRIIEKNMYARPDDTGRICVIIILSLAILNNVYTLIAQFIRYL 191

  Fly   229 TTRFMLIRNILSH 241
            .:: ..||.|..|
 Worm   192 KSQ-RQIRFINKH 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17717NP_572327.1 RINGv 91..138 CDD:128983 18/46 (39%)
marc-1NP_001122964.1 RINGv 51..96 CDD:128983 18/47 (38%)

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