DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17717 and marchf4b

DIOPT Version :10

Sequence 1:NP_572327.1 Gene:CG17717 / 31592 FlyBaseID:FBgn0029877 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_001025336.1 Gene:marchf4b / 562065 ZFINID:ZDB-GENE-041210-304 Length:378 Species:Danio rerio


Alignment Length:107 Identity:36/107 - (33%)
Similarity:45/107 - (42%) Gaps:14/107 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 GAQPPQSAAAEAICSSQIVASAHGTPTASTAALEISSARQRMLRSHLQESLHSANESGNSCRICR 95
            ||....||.|:        |:|.|:.....||.|.|..|:....|.:     |..|....||||.
Zfish    61 GASTEDSAGAD--------AAAGGSGWTGAAAEEFSRDRKDDRFSFI-----SYAEGTPVCRICF 112

  Fly    96 WNRNDMEIIKCPCNCKGSVGYIHLKCLKRWIMHRRDNRCEIC 137
            ......|::. ||.|.|||...|..||.:||..|....||:|
Zfish   113 QGPEKGELLS-PCRCSGSVRSTHQPCLIKWISERGSWTCELC 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17717NP_572327.1 RINGv 91..138 CDD:128983 20/47 (43%)
marchf4bNP_001025336.1 RING_CH-C4HC3_MARCH4_9 108..157 CDD:319725 20/47 (43%)

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