DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17717 and Marchf4

DIOPT Version :9

Sequence 1:NP_572327.1 Gene:CG17717 / 31592 FlyBaseID:FBgn0029877 Length:266 Species:Drosophila melanogaster
Sequence 2:XP_001074008.1 Gene:Marchf4 / 367295 RGDID:1590797 Length:409 Species:Rattus norvegicus


Alignment Length:128 Identity:38/128 - (29%)
Similarity:51/128 - (39%) Gaps:15/128 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 ESAGNATMPLGAQPPQSAAAEAICSSQIVASAHGTPTASTAALEISSARQRMLRSHLQESLHSAN 85
            |:.|..|.||...||...:.|.......:.     |.||.    :|||..........|..:|..
  Rat    96 EAVGRETPPLPPPPPLPPSVEDDWDGPAIG-----PPASL----LSSASSDEFCKEKTEDCYSLG 151

  Fly    86 --ESGNS---CRICRWNRNDMEIIKCPCNCKGSVGYIHLKCLKRWIMHRRDNRCEICNAVFNI 143
              :||..   ||||.......|::. ||.|.|||...|..||.:||..|....||:|...:::
  Rat   152 SLDSGMRTPLCRICFQGPEQGELLS-PCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKYHV 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17717NP_572327.1 RINGv 91..138 CDD:128983 19/46 (41%)
Marchf4XP_001074008.1 RINGv 162..207 CDD:128983 19/45 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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