DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17717 and CG2991

DIOPT Version :9

Sequence 1:NP_572327.1 Gene:CG17717 / 31592 FlyBaseID:FBgn0029877 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_608725.1 Gene:CG2991 / 33488 FlyBaseID:FBgn0031474 Length:562 Species:Drosophila melanogaster


Alignment Length:187 Identity:40/187 - (21%)
Similarity:76/187 - (40%) Gaps:42/187 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 QRMLRSHLQESLHSAN--------ESGNS------CRICRWNRNDMEIIKCPCNCKGSVGYIHLK 120
            :::|...:..|:.:.|        |.|.|      |.|| ::.:..|.:..||.|.|.|..:|.:
  Fly   357 RKLLSRQIDPSIPTLNAETNKLSPEEGQSFLTKKDCWIC-YDSDKPEPLIQPCRCTGDVSSVHHE 420

  Fly   121 CLKRWIMHRRDN-----RCEICNAVFNIAEERA------------SLKQMIRTFCC--GRCCGLI 166
            |||||::....|     .|::|...:.|.:.:.            |...::.|..|  |....::
  Fly   421 CLKRWLVESCSNSEAQLSCKVCGHPYEIEKSKKLEWDKGFTIQHWSKTVILITLMCVTGATAWVV 485

  Fly   167 VKHL---LFSASLMPLAHIILQQVLQCMDNMNQGSTDQLTVQEVFVASCALLTSSAL 220
            ::..   |.....:.:|.:|....::|:     |....:..|...|:|..::|||.:
  Fly   486 IQMYVDPLVRVMTVGIAVLIGYVCVKCL-----GENTVVAYQRAKVSSINIVTSSEM 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17717NP_572327.1 RINGv 91..138 CDD:128983 17/51 (33%)
CG2991NP_608725.1 SSM4 389..>494 CDD:227510 23/105 (22%)
RING_CH-C4HC3_MARCH 392..443 CDD:319409 17/51 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5183
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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