DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17717 and Marchf10

DIOPT Version :9

Sequence 1:NP_572327.1 Gene:CG17717 / 31592 FlyBaseID:FBgn0029877 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_001013995.1 Gene:Marchf10 / 303596 RGDID:1311692 Length:790 Species:Rattus norvegicus


Alignment Length:154 Identity:36/154 - (23%)
Similarity:72/154 - (46%) Gaps:17/154 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 ALEISSARQRMLRSHLQESL--HSANESGNSCRICR-WNRNDMEIIKCPCNCKGSVGYIHLKCLK 123
            |.||.:..:::.:  |||||  ..:.|.|:.||||: ...:....:..||.|.||:.::|.:|||
  Rat   612 ATEIKADPEKLRK--LQESLLEEDSEEEGDLCRICQIAGGSPANPLLEPCGCVGSLQFVHQECLK 674

  Fly   124 RWIMHRRDN--------RCEICNAVFNIAEERASLKQMIRTFCCGRCCGLIVKHLLFSASLMPLA 180
            :|:..:..:        .||:|.....:..:..::.:........|....::...|:   |:.|.
  Rat   675 KWLKVKITSGADLSTVKTCEMCKQGLLVDLDDFNMTEFYHKHQQSRAQSELMNSGLY---LVLLL 736

  Fly   181 HIILQQVLQCMD-NMNQGSTDQLT 203
            |:..|:..:.|. |..:.|.::::
  Rat   737 HLYEQRFAELMTLNYRRASRERMS 760

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17717NP_572327.1 RINGv 91..138 CDD:128983 16/55 (29%)
Marchf10NP_001013995.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..240
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 323..416
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 507..569
RING_CH-C4HC3_MARCH10 641..700 CDD:319727 17/58 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 757..790 0/4 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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