DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17717 and marc-2

DIOPT Version :9

Sequence 1:NP_572327.1 Gene:CG17717 / 31592 FlyBaseID:FBgn0029877 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_496302.2 Gene:marc-2 / 183961 WormBaseID:WBGene00008433 Length:206 Species:Caenorhabditis elegans


Alignment Length:183 Identity:43/183 - (23%)
Similarity:64/183 - (34%) Gaps:61/183 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 ESLHSANESGNS---CRICRWNRNDMEIIKCPCNCKGSVGYIHLKCLKRWIMHRRDNRCEICNAV 140
            |::.|..|....   ||||..|....:.:..||:|.|:|.|:|..||::|:....:.:|.||..:
 Worm    10 ETIRSPKEVSTKTVICRICFDNDTSSDSLIKPCSCSGTVAYVHNGCLEQWVRTTSNIQCTICQDM 74

  Fly   141 FNIAEERASLKQMIRTFCCGRCCGLIVKHLLFSASLMPLAHIILQQVL--QCMDNMNQGSTDQLT 203
            |.                            |..|.|.....|.|.:.|  |..|.|..|      
 Worm    75 FE----------------------------LIPAGLKDWNKITLPRPLSEQLEDYMEFG------ 105

  Fly   204 VQEVFVASCALLTSSALFFHFFEFVTTRF---MLIRNI---------LSHWWM 244
                    |.|  :..::...|.:|..|:   .:|.|:         .|.|||
 Worm   106 --------CTL--AWVVYMLRFAYVGLRYGSRSMIENVDMAIGTGMMRSFWWM 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17717NP_572327.1 RINGv 91..138 CDD:128983 17/46 (37%)
marc-2NP_496302.2 RINGv 24..72 CDD:128983 17/47 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000792
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR46065
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.