DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf128 and RNF128

DIOPT Version :9

Sequence 1:NP_001166820.1 Gene:Rnf128 / 315911 RGDID:1566282 Length:428 Species:Rattus norvegicus
Sequence 2:NP_919445.1 Gene:RNF128 / 79589 HGNCID:21153 Length:428 Species:Homo sapiens


Alignment Length:428 Identity:408/428 - (95%)
Similarity:416/428 - (97%) Gaps:0/428 - (0%)


- Green bases have known domain annotations that are detailed below.


  Rat     1 MGPPPGIGVYCRGGCGAARLLAWCFLLALSPHAPGSRGAEAVWTAYLNVSWRVPHPGVNRTVWEL 65
            ||||||.||.||||||.:|||||||||||||.|||||||||||||||||||||||.|||||||||
Human     1 MGPPPGAGVSCRGGCGFSRLLAWCFLLALSPQAPGSRGAEAVWTAYLNVSWRVPHTGVNRTVWEL 65

  Rat    66 SEEGVYGQDSPLEPVSGVLVPPDGPGALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFAD 130
            |||||||||||||||:|||||||||||||||||||||||||||||||||||||||||||||||||
Human    66 SEEGVYGQDSPLEPVAGVLVPPDGPGALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFAD 130

  Rat   131 KIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAGDIVAIMIGNLKGTKILQSIQRGIQVTMVIEV 195
            |||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Human   131 KIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMIGNLKGTKILQSIQRGIQVTMVIEV 195

  Rat   196 GKKHGPWVNHYSIFFVSVSFFIITAATVGYFIFYSARRLRNARAQSRKQRQLKADAKKAIGRLQL 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Human   196 GKKHGPWVNHYSIFFVSVSFFIITAATVGYFIFYSARRLRNARAQSRKQRQLKADAKKAIGRLQL 260

  Rat   261 RTLKQGDKEIGPDGDSCAVCIELYKPNDVVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDILKAL 325
            ||||||||||||||||||||||||||||:||||||||||||||||||||||||||||||||||||
Human   261 RTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDILKAL 325

  Rat   326 GIEVDVEDGSVSLQVPVSNEASNTASPHEEDNRSETASSGYASVQGADEPPLEEHAQSANENLQL 390
            ||||||||||||||||||||.||:||.|||||||||||||||||||.||||||||.||.||:|||
Human   326 GIEVDVEDGSVSLQVPVSNEISNSASSHEEDNRSETASSGYASVQGTDEPPLEEHVQSTNESLQL 390

  Rat   391 VNHEANSVAVDVVPHVDNPTFEEDETPDQEMAVREVKS 428
            ||||||||||||:||||||||||||||:||.||||:||
Human   391 VNHEANSVAVDVIPHVDNPTFEEDETPNQETAVREIKS 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf128NP_001166820.1 PA_GRAIL_like 48..193 CDD:239037 141/144 (98%)
zf-RING_2 275..318 CDD:290367 41/42 (98%)
RNF128NP_919445.1 PA_GRAIL_like 48..193 CDD:239037 141/144 (98%)
RING-H2_RNF128_like 275..323 CDD:319716 46/47 (98%)
RING-H2 finger (C3H2C3-type) 277..317 CDD:319716 38/39 (97%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 346..428 70/81 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83677941
Domainoid 1 1.000 202 1.000 Domainoid score I23950
eggNOG 00.000 Not matched by this tool.
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11337
Inparanoid 1 1.050 845 1.000 Inparanoid score I6979
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG39235
OrthoDB 1 1.010 - - D119958at40674
OrthoFinder 1 1.000 - - FOG0011956
OrthoInspector 1 1.000 - - oto130857
orthoMCL 1 0.900 - - OOG6_115655
Panther 1 1.100 - - LDO PTHR22765
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X295
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1515.410

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