DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf128 and Rnf128

DIOPT Version :9

Sequence 1:NP_001166820.1 Gene:Rnf128 / 315911 RGDID:1566282 Length:428 Species:Rattus norvegicus
Sequence 2:NP_075759.3 Gene:Rnf128 / 66889 MGIID:1914139 Length:428 Species:Mus musculus


Alignment Length:428 Identity:421/428 - (98%)
Similarity:425/428 - (99%) Gaps:0/428 - (0%)


- Green bases have known domain annotations that are detailed below.


  Rat     1 MGPPPGIGVYCRGGCGAARLLAWCFLLALSPHAPGSRGAEAVWTAYLNVSWRVPHPGVNRTVWEL 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Mouse     1 MGPPPGIGVYCRGGCGAARLLAWCFLLALSPHAPGSRGAEAVWTAYLNVSWRVPHTGVNRTVWEL 65

  Rat    66 SEEGVYGQDSPLEPVSGVLVPPDGPGALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFAD 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse    66 SEEGVYGQDSPLEPVSGVLVPPDGPGALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFAD 130

  Rat   131 KIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAGDIVAIMIGNLKGTKILQSIQRGIQVTMVIEV 195
            |||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   131 KIHLASERGASGAVIFNFPGTRNEVIPMSHPGAGDIVAIMIGNLKGTKILQSIQRGIQVTMVIEV 195

  Rat   196 GKKHGPWVNHYSIFFVSVSFFIITAATVGYFIFYSARRLRNARAQSRKQRQLKADAKKAIGRLQL 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||
Mouse   196 GKKHGPWVNHYSIFFVSVSFFIITAATVGYFIFYSARRLRNARAQSRKQRQLKADAKKAIGKLQL 260

  Rat   261 RTLKQGDKEIGPDGDSCAVCIELYKPNDVVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDILKAL 325
            ||||||||||||||||||||||||||||:||||||||||||||||||||||||||||||||||||
Mouse   261 RTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDILKAL 325

  Rat   326 GIEVDVEDGSVSLQVPVSNEASNTASPHEEDNRSETASSGYASVQGADEPPLEEHAQSANENLQL 390
            |||||||||||||||||||||||||||||||:|||||||||||||||||||||||||||||||||
Mouse   326 GIEVDVEDGSVSLQVPVSNEASNTASPHEEDSRSETASSGYASVQGADEPPLEEHAQSANENLQL 390

  Rat   391 VNHEANSVAVDVVPHVDNPTFEEDETPDQEMAVREVKS 428
            ||||||||||||||||||||||||||||||.||||:||
Mouse   391 VNHEANSVAVDVVPHVDNPTFEEDETPDQEAAVREIKS 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf128NP_001166820.1 PA_GRAIL_like 48..193 CDD:239037 142/144 (99%)
zf-RING_2 275..318 CDD:290367 41/42 (98%)
Rnf128NP_075759.3 PA_GRAIL_like 48..193 CDD:239037 142/144 (99%)
zf-RING_2 275..318 CDD:290367 41/42 (98%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 342..428 82/85 (96%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C55114240
Domainoid 1 1.000 215 1.000 Domainoid score I26292
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11337
Inparanoid 1 1.050 870 1.000 Inparanoid score I8080
OMA 1 1.010 - - QHG39235
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 1 1.000 - - FOG0011956
OrthoInspector 1 1.000 - - oto165864
orthoMCL 1 0.900 - - OOG6_115655
Panther 1 1.100 - - LDO PTHR22765
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X295
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.910

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