DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34417 and SPECC1

DIOPT Version :9

Sequence 1:NP_001259282.1 Gene:CG34417 / 31591 FlyBaseID:FBgn0085446 Length:5182 Species:Drosophila melanogaster
Sequence 2:XP_016880808.1 Gene:SPECC1 / 92521 HGNCID:30615 Length:1076 Species:Homo sapiens


Alignment Length:1249 Identity:259/1249 - (20%)
Similarity:424/1249 - (33%) Gaps:413/1249 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  4041 PR---SATTYSNTPSPSSTATSPIGLPWVAKPKVDNSDFRRKAHHFEERSLRDNIEQQQQPTYPN 4102
            ||   |:.|.||||:|:....:|     ..|||.:|....:.|...:.|.|....:.:....   
Human   128 PRKSVSSPTSSNTPTPTKHLRTP-----STKPKQENEGGEKAALESQVRELLAEAKAKDSEI--- 184

  Fly  4103 GNNGYLQRHNSLRSKAPALSEFKKRPSL----PNAMDP---GTAAPPRQVYQAPPPPTNISFTYA 4160
                     |.|||:   |.::|::.:|    .:|:.|   ||:..|                 .
Human   185 ---------NRLRSE---LKKYKEKRTLNAEGTDALGPNVDGTSVSP-----------------G 220

  Fly  4161 DFPPVRRPQGASAHNYRSQPCLTSAVDQVEALTNPLGAPLVLTSSNPTYLPPPGSRRFDYISS-P 4224
            |..|:.|.......|::.:      :..:|.....|...|:....:|.   ..|:......|| |
Human   221 DTEPMIRALEEKNKNFQKE------LSDLEEENRVLKEKLIYLEHSPN---SEGAASHTGDSSCP 276

  Fly  4225 VDVDADSPPNSPTSFMTMPNPTLMTDNTDDDLDLDSDNNMLEYRAETKVMRKPRSQTAVRVADRR 4289
            ..:..:|...|||.           :....|:|        ||                    ::
Human   277 TSITQESSFGSPTG-----------NQMSSDID--------EY--------------------KK 302

  Fly  4290 NAHMSDDEVYGKNSRAAKSLLYTMKQLGGGPGNASVGNSGQRRQPLTAPSSPKSGCLSPDGRPYQ 4354
            |.|                            ||| :..||.....:|..|      ||||...::
Human   303 NIH----------------------------GNA-LRTSGSSSSDVTKAS------LSPDASDFE 332

  Fly  4355 APLVE-PLFPQLSTFEPKRQPQFANSPMST----PPAVSMPSINYQANPTYTPPRSNQNSNSYLG 4414
            ....| |..|..||..|     |.:|..||    |.:||..|:   |:.|....:..:|.:|...
Human   333 HITAETPSRPLSSTSNP-----FKSSKCSTAGSSPNSVSELSL---ASLTEKIQKMEENHHSTAE 389

  Fly  4415 ETNTSYVVTYPLDDSGDEPEPESMATSVSQRLRRTSEHSNASSSLSLGSTSWTANPVHNTVPSVP 4479
            |...:      |.:..|:.:.....|:.:::|                                 
Human   390 ELQAT------LQELSDQQQMVQELTAENEKL--------------------------------- 415

  Fly  4480 LDSAMGPPVDRSTKPQVSQPVGPKMPQHVAQKQIPQQLPNQLPQQIPQQLPK-------QLPQQI 4537
                    ||..|..:.|.....:..:.::|:.  ::|.|.|.:::..:.|.       :|.|:.
Human   416 --------VDEKTILETSFHQHRERAEQLSQEN--EKLMNLLQERVKNEEPTTQEGKIIELEQKC 470

  Fly  4538 PQQLPQ-QLPQQLPKQLPQQIPPQLPKQLPQQIPQPELPQQLPN---------NLPRH-----AP 4587
            ...|.| :..::....:.||:...|.|...:.....|:.::|..         .|.||     |.
Human   471 TGILEQGRFEREKLLNIQQQLTCSLRKVEEENQGALEMIKRLKEENEKLNEFLELERHNNNMMAK 535

  Fly  4588 KLSSRSHTIQGDSGYENRPLQNRVMSQQ---TLNSSIITSNNHTTVQKQQK---------EQHIN 4640
            .|.....|::| ...||..|::.:..::   |..|::..:.....||:..|         |...|
Human   536 TLEECRVTLEG-LKMENGSLKSHLQGEKQKATEASAVEQTAESCEVQEMLKVARAEKDLLELSCN 599

  Fly  4641 ELRRKSLGNVLESSQRSTYFEQEYKSSAPPDTPDIVKSSLPKEDAPLLKKFGPPQRHHYMPNSYQ 4705
            |||::.|....|....|:...:..:.|          |.|.::|...||:.          ..:|
Human   600 ELRQELLKANGEIKHVSSLLAKVRRDS----------SLLVEKDYSYLKEI----------CDHQ 644

  Fly  4706 SPQLN----KQGNSNSTTTSSTSVRSTTVVQQQHHQQQHQQIKPSIVETPATPQPQVPPEDEIPH 4766
            :.||:    |.....|.:.:.......|:.:.:...:||:.:|                      
Human   645 AEQLSRTSLKLQEKASESDAEIKDMKETIFELEDQVEQHRAVK---------------------- 687

  Fly  4767 NIVFNN--VSAFTSMSRRNHEEDSHQGTQSGSRVNRL-SKCDSWNQI---------------CQL 4813
              :.||  :|...|...:..|:.|....|..:...:: .:.:.|.:.               |:.
Human   688 --LHNNQLISELESSVIKLEEQKSDLERQLKTLTKQMKEETEEWRRFQADLQTAVVVANDIKCEA 750

  Fly  4814 QQTAGPSPAKYNQPGSPGELRRTKSGHSLAVPKLYEAGIDKAQVSEKQRTVAAY---FSGQKSPT 4875
            ||                |||..|.       ||.|.....|::.::...|..:   .:.:.:|.
Human   751 QQ----------------ELRTVKR-------KLLEEEEKNARLQKELGDVQGHGRVVTSRAAPP 792

  Fly  4876 GGQVEELRTSMTTTTSSR--KSAINRTKTSEKLSAAARKSLSSLTTTSNGNVSTAGLGMVVRGGG 4938
              .|:|...|.....:.|  ...::||..:...||...|||          :.:..||   |.||
Human   793 --PVDEEPESSEVDAAGRWPGVCVSRTSPTPPESATTVKSL----------IKSFDLG---RPGG 842

  Fly  4939 VG--------------GI----GGGAALS---RSATMPHIANLNLLDESNVEDA----FEQLMMA 4978
            .|              ||    ...||:|   |.:|.           |:|..|    .::|.:.
Human   843 AGQNISVHKTPRSPLSGIPVRTAPAAAVSPMQRHSTY-----------SSVRPASRGVTQRLDLP 896

  Fly  4979 QHKSSSSSEQRTETKSKDGGATVTTTTTKVT---------TRTVSGSAASKNISPLAKFKQLDKQ 5034
            ....|...:.||||...|.....:.:...::         ||.:  ||:::...|.:|.      
Human   897 DLPLSDILKGRTETLKPDPHLRKSPSLESLSRPPSLGFGDTRLL--SASTRAWKPQSKL------ 953

  Fly  5035 AAAQQAQKSSPTTSTPTTPGGSAQPLFKFTDPALNARAATVKDQLLQWCKHKTQEYENVQINNFS 5099
                ..::..|..:.....|||.                  ::.||:||:.|||.|.|:.|.|||
Human   954 ----SVERKDPLAALAREYGGSK------------------RNALLKWCQKKTQGYANIDITNFS 996

  Fly  5100 SSWSDGLAFCALIHHFLPDAFDYTTLTKQTRRHNFELAFSVADEKAGIAPLLDVEDMVEMSRPDW 5164
            ||||||||||||:|.:||....|..|..|.::.|..|||..| |..||.|.|::.:|:...||||
Human   997 SSWSDGLAFCALLHTYLPAHIPYQELNSQEKKRNLLLAFEAA-ESVGIKPSLELSEMLYTDRPDW 1060

  Fly  5165 KCVFVYVQSIYRRF 5178
            :.|..||..||:.|
Human  1061 QSVMQYVAQIYKYF 1074

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34417NP_001259282.1 Smoothelin 2594..2636 CDD:289290
Smoothelin 3127..3176 CDD:289290
GBP_C <3810..3882 CDD:303769
coiled coil 3857..3868 CDD:293879
CH 5076..5179 CDD:237981 52/103 (50%)
SPECC1XP_016880808.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4678
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23167
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.