DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34417 and CHS5

DIOPT Version :9

Sequence 1:NP_001259282.1 Gene:CG34417 / 31591 FlyBaseID:FBgn0085446 Length:5182 Species:Drosophila melanogaster
Sequence 2:NP_013434.1 Gene:CHS5 / 851041 SGDID:S000004322 Length:671 Species:Saccharomyces cerevisiae


Alignment Length:703 Identity:143/703 - (20%)
Similarity:257/703 - (36%) Gaps:169/703 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1736 IIDHMAPKSPKTERRSQGGTGNVPSPIRKLPVTERKESAPVPRVTRRDKAEKVTRST---SENII 1797
            ||.....::.:.|::.:....::.:.|.:...|.:.|| ||.::.      .||:::   :.:.:
Yeast    44 IIKMQVSQNLEEEKKQRNHFKSIQAKILEKYGTHKPES-PVLKIV------NVTQTSCVLAWDPL 101

  Fly  1798 KMSGTKPHPEMSS--LKPGGDRS----RPSKCCTTKTINLSEQ---------------------- 1834
            |:...|    :.|  |...|.||    .|.|..|||...||..                      
Yeast   102 KLGSAK----LKSLILYRKGIRSMVIPNPFKVTTTKISGLSVDTPYEFQLKLITTSGTLWSEKVI 162

  Fly  1835 -RINTATDIEGVIIDIQQAKSSREPSPDRIV---------PTPVPAELETGKPRYPDVVQEPDDE 1889
             |.:..||:.|:.:.:......:|.|..:|.         |......::|......|:..|..:|
Yeast   163 LRTHKMTDMSGITVCLGPLDPLKEISDLQISQCLSHIGARPLQRHVAIDTTHFVCNDLDNEESNE 227

  Fly  1890 PRRKPQVTNIPIFEEESQTYV-GCQISE-LHSSNGIEVD----ILDNPTVEAPKSLDYPVNTPDT 1948
            ...:.:..||||...|   :| .|::.: :....|..:|    ||.|.|..       |||    
Yeast   228 ELIRAKHNNIPIVRPE---WVRACEVEKRIVGVRGFYLDADQSILKNYTFP-------PVN---- 278

  Fly  1949 DESLLSVHEKVSRFTHSAEKVKEPKVSAPFSREFDVNAKIPENDDCLLSINQKVDKFLRTAENVI 2013
                             .|::...|.:.|.:...|.| |:||:       ...|::.....:|..
Yeast   279 -----------------EEELSYSKENEPVAEVADEN-KMPED-------TTDVEQVASPNDNES 318

  Fly  2014 RPTSLPSRPEIERPGLEEIDEELLRDDCTLSVSQKVHKFIDTAEKLAPTMPQKSPRLVANIERHI 2078
            .|:.  ::.:.|:.|.|......:.|....|.:.:....|:|......:: :..|....|||.:.
Yeast   319 NPSE--AKEQGEKSGHETAPVSPVEDPLHASTALENETTIETVNPSVRSL-KSEPVGTPNIEENK 380

  Fly  2079 SRQS------EP-----ERELDEESEPELDRDTDVEDDDQTSQ--LETEEEITQTVTKKETLKEF 2130
            :..|      ||     |...:||:..:...|||...::|...  ::|||.....:|        
Yeast   381 ADSSAEAVVEEPNEAVAESSPNEEATGQKSEDTDTHSNEQADNGFVQTEEVAENNIT-------- 437

  Fly  2131 KQQTKETRETRRDSKAE---PEKLQKKSPQTKVKEESARVPKYQAKVSQKVSQWEPKKQPQREPK 2192
            .:...|..|...|:..|   || .:.::|:.....|.|..|...:.        ||.:...:..|
Yeast   438 TESAGENNEPADDAAMEFGRPE-AEIETPEVNESIEDANEPAEDSN--------EPVEDSNKPVK 493

  Fly  2193 VTQKETPLEPKKQPLSKVKDEPEKVNKREPKVPQKESQTKLKEEPERVTKKTPQKEPRKEPLRQS 2257
            .:.|  |:|...:|:       |..||     |.::|...:::..|.|...:...|...||::::
Yeast   494 DSNK--PVEDSNKPV-------EDSNK-----PVEDSNKPVEDANEPVEDTSEPVEDAGEPVQET 544

  Fly  2258 EDEPEF-----SP---EEEFDDEPLPMTKTHTTAIEMKRQKDILNRPSVFGQRTPE-----RKSS 2309
            .   ||     ||   ||:.:.|..|...|.:.|:|...: |:  :|...|....:     .|.:
Yeast   545 N---EFTTDIASPRHQEEDIELEAEPKDATESVAVEPSNE-DV--KPEEKGSEAEDDINNVSKEA 603

  Fly  2310 TTPSPTKLNGTRGRPSPSTNLITEEKRSYRNQVTN---VSKPGTRKTTPSANS 2359
            .:...|....|....|..::.:|||:.:...:|..   :|....:|.|.::||
Yeast   604 ASGESTTHQKTEASASLESSAVTEEQETTEAEVNTDDVLSTKEAKKNTGNSNS 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34417NP_001259282.1 Smoothelin 2594..2636 CDD:289290
Smoothelin 3127..3176 CDD:289290
GBP_C <3810..3882 CDD:303769
coiled coil 3857..3868 CDD:293879
CH 5076..5179 CDD:237981
CHS5NP_013434.1 Chs5_N 4..76 CDD:260117 4/31 (13%)
fn3_2 77..165 CDD:407129 20/98 (20%)
BRCT_CHS5_like 172..255 CDD:349373 16/85 (19%)
MDN1 <366..607 CDD:227596 60/278 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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