DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34417 and ACTN4

DIOPT Version :10

Sequence 1:NP_001259282.1 Gene:CG34417 / 31591 FlyBaseID:FBgn0085446 Length:5182 Species:Drosophila melanogaster
Sequence 2:NP_001427225.1 Gene:ACTN4 / 81 HGNCID:166 Length:933 Species:Homo sapiens


Alignment Length:123 Identity:49/123 - (39%)
Similarity:66/123 - (53%) Gaps:0/123 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly  5060 LFKFTDPALNARAATVKDQLLQWCKHKTQEYENVQINNFSSSWSDGLAFCALIHHFLPDAFDYTT 5124
            :.:|....::....:.|:.||.||:.||..|:||.:.||..||.|||||.||||...|:..:|..
Human   150 ILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHISWKDGLAFNALIHRHRPELIEYDK 214

  Fly  5125 LTKQTRRHNFELAFSVADEKAGIAPLLDVEDMVEMSRPDWKCVFVYVQSIYRRFRNCQ 5182
            |.|.....|...||.||::...|..:||.||:|..:|||.|.:..||.|.|..|...|
Human   215 LRKDDPVTNLNNAFEVAEKYLDIPKMLDAEDIVNTARPDEKAIMTYVSSFYHAFSGAQ 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34417NP_001259282.1 PHA03247 <566..1191 CDD:223021
PTZ00449 <1035..1421 CDD:185628
PTZ00449 <1394..1702 CDD:185628
PTZ00121 <2080..2248 CDD:173412
Smoothelin 2594..2636 CDD:463614
Smoothelin 3127..3176 CDD:463614
Smc <3810..>3916 CDD:440809
PHA03247 <4126..4601 CDD:223021
CH_SMTN-like 5074..5179 CDD:409049 46/104 (44%)
ACTN4NP_001427225.1 None
Blue background indicates that the domain is not in the aligned region.

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