DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34417 and micall2

DIOPT Version :9

Sequence 1:NP_001259282.1 Gene:CG34417 / 31591 FlyBaseID:FBgn0085446 Length:5182 Species:Drosophila melanogaster
Sequence 2:NP_001072513.1 Gene:micall2 / 779968 XenbaseID:XB-GENE-979747 Length:1023 Species:Xenopus tropicalis


Alignment Length:1126 Identity:229/1126 - (20%)
Similarity:379/1126 - (33%) Gaps:365/1126 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  2204 KQPLSKVKDEP--EKVNKREPKVPQKESQTKLKEEPERVTKKTPQKEPRKEPLRQSEDEPEFSPE 2266
            |:|.....:||  :||.......||             .|.:.||..||..              
 Frog   119 KRPPPDTVEEPAGKKVTNDVLPTPQ-------------ATSRAPQPVPRTN-------------- 156

  Fly  2267 EEFDDEPLPMTKTHTTAIEMKRQKDILNRPSVFGQRTPERKSSTTPSPTKLNGTRGRPSPSTNLI 2331
                   :|:.|::|.         |.|.|...|.|..:..||.: |...:.|..      .:|:
 Frog   157 -------VPVLKSNTV---------IENPPVRAGIREIDSNSSVS-SNCMICGKH------VHLV 198

  Fly  2332 ----TEEKRSYRN-----QVTNVSKPGTRK------------------TTPSANSPAQSPPPKTT 2369
                .:.|..:||     |.:...:||..|                  |:|...:...:.|...|
 Frog   199 QRHMADGKLYHRNCFKCKQCSRTLQPGQYKAGDGLGSFICTNHHIAVPTSPVTRTIMPAAPHGAT 263

  Fly  2370 SISKRMEQISQQSWVVQDVDVDVEVVGPAPPSHISEKPQGKSPSPTSSRS-LSRSPSRSPSRRTS 2433
            ...|:      .|||             .|.|.:.:: ..|:|......| |.....:.|:.||:
 Frog   264 VDEKK------SSWV-------------TPRSAVLDQ-NNKTPGNRFDHSGLGTGAVQDPTNRTA 308

  Fly  2434 TNLNTT------STNTTTTTEHPSTIKTTTP---KPTST-----NPSKDEPEIIPIESLTEKSIT 2484
            ....:.      ||......:.||.....:|   ..|||     |..||....|.|.|..:..:.
 Frog   309 VGFVSNNQKLQHSTGAPAQEDKPSRNILNSPYSSSSTSTAVGFGNSIKDNSSTITIGSNQQNKVD 373

  Fly  2485 TTYTTNTTGRNVASRRNVFEPVHETHVDSEPTGRRPSYMDHTKSSLEHIRRDSLEINKSHYSRKS 2549
            ..|.  .|.|:||         ||     :|  ::||             .|.|    :|..:..
 Frog   374 NNYL--NTSRSVA---------HE-----QP--KKPS-------------SDLL----THKGKSE 403

  Fly  2550 SMEDDSP--VEPRNPNSSV-KFDVPRKSSSRGADEPRKTSLKGKDEDSDLELEIEEIFDLQRLEK 2611
            ..:|..|  .:.::||.:: .....|.::....|||::||.|        ..|:....:....|:
 Frog   404 PQKDPLPSNQQIKSPNFTINSISAGRMTTLVTKDEPKETSPK--------PWELSAAKNKAARER 460

  Fly  2612 LLET-VASYEMRRRIRAQMRLIRKNMINAGTTTTITT---ITTSTTP-------------GKSSP 2659
            ..:| .|..|...::.::..:..|:....|.:|..:.   ||.|:|.             |.:||
 Frog   461 FFQTSPAVVEPANKVSSRDVVSPKSSDGPGKSTASSLSPGITDSSTEKDNARNYLLKTLGGPTSP 525

  Fly  2660 LPKIRRDQSPAGAAEVKTKEVRTTTSRRQQQQRVEQVDSTTPIAPGKTSPH--------GKPPVK 2716
                    .|:|.||..:...|  ..|...::..:..:|:|.:.|.:..|.        .|..:.
 Frog   526 --------KPSGEAENPSPVYR--PHRLLNEKTADPSNSSTKVEPARPVPKERKNKNDTAKAVLN 580

  Fly  2717 PRERSASPAQKRRISPPGKQSPGDRSTTTTTKVTTT-------STTRGAPSKPAQGPIWADRSKV 2774
            |.....:|.    .|..|..:|...::::|||..||       |||:|..:     ||....|..
 Frog   581 PEPLLTTPT----YSSKGITTPSTGNSSSTTKGITTPSSGNSSSTTKGIST-----PITGSSSST 636

  Fly  2775 LKGHATVPQTNGSTPRKGSTSSTTSSSGKITRTMTSSSTTTSSSSTTNTRNKQREEDSITSSYGV 2839
            .||.        :||..|::||||..   |:..:|.:.::|:.|..:.:...||.|:  .||.|.
 Frog   637 TKGI--------TTPSSGNSSSTTKG---ISSPITGNGSSTTKSYLSKSGPGQRAEE--ISSKGP 688

  Fly  2840 GP--------TDENGLPLFGIRALKKKATPPAEEPCETKQEVTGYVIEEQFYSDNKSPPRHERKE 2896
            .|        |.||..     :.||..|..| :.|...:.:|  |.:.:...:..|:.|..::..
 Frog   689 VPNSNVSKQETPENWR-----QNLKPIAKTP-QTPGVVQPKV--YPLPKDVENAAKTTPSPQKTP 745

  Fly  2897 LIYSSNADELAAIKQQLQDEDDSSPPLLDARVVREFKKVESQQSLPEDARYVRRGSVKELSEKFI 2961
            .|.:|....|....::.:..:..:||...::               ||                 
 Frog   746 TIINSVKTTLNFPGKENKPSECLTPPAAKSK---------------ED----------------- 778

  Fly  2962 RKESSSSTHSTHSSIAQSLVRHED------ETEDDSESNDVCSVIEAPQMRQNQSHTMSTTRSSN 3020
             |.|||.|......:..:|....|      :.:|.|..:|.         ::..:|:....||.|
 Frog   779 -KASSSPTPPRKKLLPVNLDLINDWPKPVQKWQDVSLKDDT---------KRPAAHSSVNERSKN 833

  Fly  3021 TRS-------FLNSSADQRQVTSVD---DVLE--------RMRNADNVEEPGDSSED-------- 3059
            ..|       ::.....|||:..::   |.||        ::|:.|     ||.|||        
 Frog   834 DASRNKARPEYIPKEEIQRQLQIIEQELDALEQQGVEMEKQLRSCD-----GDESEDTLMVDWFK 893

  Fly  3060 --REARALLNKFLGASVIMQGVESMLPPTATGQRLNSQGVKTTRITNTYSKSGNSTSTTNNTSNT 3122
              .|.:.||.:           ||.|...:..|.|.             .|..|..:...|..|.
 Frog   894 LIHEKQLLLRQ-----------ESELNYISKQQALE-------------DKQSNVDTELRNLMNK 934

  Fly  3123 TNKVSSSSAPVTRTTCDIEEIWDEQVLKQLL----EQASTYE--ERRKIRAR----LRELMAERE 3177
            .:.:        :|..|.|.  ::|:|.|||    :::...|  :..:||.:    :.|.|.:|.
 Frog   935 PDDL--------KTPADRER--EKQLLDQLLVIVNDRSGIVECLDEDRIREKEEDEIMEAMIQRH 989

  Fly  3178 EQKNLKQAPKEEKEEEESSAS 3198
            .:.:.|:|..|...:..|..|
 Frog   990 SENHQKEASPEPNLKRRSRFS 1010

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34417NP_001259282.1 Smoothelin 2594..2636 CDD:289290 6/42 (14%)
Smoothelin 3127..3176 CDD:289290 13/58 (22%)
GBP_C <3810..3882 CDD:303769
coiled coil 3857..3868 CDD:293879
CH 5076..5179 CDD:237981
micall2NP_001072513.1 CH 5..102 CDD:278723
LIM_Mical_like_1 188..242 CDD:188828 9/59 (15%)
CytochromB561_N 513..>763 CDD:286826 66/289 (23%)
Epiglycanin_TR 601..666 CDD:283334 23/80 (29%)
DUF3585 846..982 CDD:288945 36/174 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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