Sequence 1: | NP_001259282.1 | Gene: | CG34417 / 31591 | FlyBaseID: | FBgn0085446 | Length: | 5182 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001139298.1 | Gene: | Specc1l / 74392 | MGIID: | 1921642 | Length: | 1135 | Species: | Mus musculus |
Alignment Length: | 1248 | Identity: | 260/1248 - (20%) |
---|---|---|---|
Similarity: | 459/1248 - (36%) | Gaps: | 321/1248 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 4125 KKRPSLPNAMDPGTAAP-------PRQVYQAPP-----PPTNISFTYADFPPVRRPQGASAHNYR 4177
Fly 4178 SQPCLTSAVDQVEALTNPLGAPLVLTSSNPTYLPPPGSRRFDYISSPVDVDADSPPNSPTSFMTM 4242
Fly 4243 -PNPTLMTDNTDDDL-------DLDSDNNMLEYRAETK------------------VMRKPRSQT 4281
Fly 4282 AVRVADRRNAHMSDDEVYGKNSRAA--KSLLYTMK------------------QLGGGPGNASVG 4326
Fly 4327 NSGQRRQPLTAPSSPKSGCLSPDGRPYQAPLVEPLFPQL---STFEPKRQPQFANSPMSTPPAV- 4387
Fly 4388 ------------SMPSINYQA-NPTYTPPRSNQNSNSYLGETNTSYVVTYPLDDSGDEPEPESMA 4439
Fly 4440 TSVSQRLRRTSEHSNASSSLSLGSTSWTANPVHNTVPSVPLDSAMG----------PPVDRSTK- 4493
Fly 4494 --PQVSQPVGPKMPQHVAQKQIPQQLPNQLPQQIPQQLPKQLPQQIPQQL---PQQLPQQ---LP 4550
Fly 4551 KQLPQQIPPQLPKQLPQQIPQPELPQQLPNNLPRHAPKLSSRSHTIQGD--SGYENRPLQNRVMS 4613
Fly 4614 ---------QQTLNSSIITSNNHTTVQKQQKE--QHINELRRKS--LGNVLESSQR------STY 4659
Fly 4660 FEQEYKSSAPPDTPDI--VKSSLPKEDAPLLKKFG-------------------PPQRHHYMPNS 4703
Fly 4704 YQSPQLNKQGNSNSTTTSSTSVRSTTVVQQQHHQQQHQQIKPSI------VETPATPQPQVPP-- 4760
Fly 4761 ---EDEIPH--------NIVFNNVSAFTSMSRRNHEEDSHQGTQSGSRVNRLSKCDS--WNQICQ 4812
Fly 4813 LQQTAG--PSPAKYNQPGSPGELRRTKSGHSLAVPKLYEA------------GIDKAQVSEKQRT 4863
Fly 4864 VAAYFSGQKSPTGGQVEELRTSMTTTTSSRKSAINRT--KTSEKLS-----AAARKSLSSLTTTS 4921
Fly 4922 NGNVSTAGLGMVVRGGGVGGIGGGAALSRSATMPHIANLNLLDE-SNVEDAFEQLMMAQHKSSSS 4985
Fly 4986 SEQRTETKSKDGGATVTTTTTKVTTRTVSGS-----------AASKNISPLAKFKQLDKQAAAQQ 5039
Fly 5040 AQKSSPTTSTPTTPGGSAQPLFKFTDPALNARA----ATVKDQLLQWCKHKTQEYENVQINNFSS 5100
Fly 5101 SWSDGLAFCALIHHFLPDAFDYTTLTKQTRRHNFELAFSVADEKAGIAPLLDVEDMVEMSRPDWK 5165
Fly 5166 CVFVYVQSIYRRF 5178 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG34417 | NP_001259282.1 | Smoothelin | 2594..2636 | CDD:289290 | |
Smoothelin | 3127..3176 | CDD:289290 | |||
GBP_C | <3810..3882 | CDD:303769 | |||
coiled coil | 3857..3868 | CDD:293879 | |||
CH | 5076..5179 | CDD:237981 | 51/103 (50%) | ||
Specc1l | NP_001139298.1 | SMC_prok_B | 219..>843 | CDD:274008 | 120/689 (17%) |
Smc | <518..819 | CDD:224117 | 48/316 (15%) | ||
SLAIN | <839..980 | CDD:373728 | 32/163 (20%) | ||
CH | 1033..1133 | CDD:237981 | 50/100 (50%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG4678 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR23167 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |