Sequence 1: | NP_001259282.1 | Gene: | CG34417 / 31591 | FlyBaseID: | FBgn0085446 | Length: | 5182 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012819429.1 | Gene: | specc1l / 733457 | XenbaseID: | XB-GENE-5937736 | Length: | 1105 | Species: | Xenopus tropicalis |
Alignment Length: | 1289 | Identity: | 273/1289 - (21%) |
---|---|---|---|
Similarity: | 466/1289 - (36%) | Gaps: | 334/1289 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 4024 PPTQQSQPPQQSQQHLQPRSATTYSNTPSPSSTATSPIGLPWVAKPKVDNSDFRRKAHHFEERSL 4088
Fly 4089 RDNIEQQQQPTYPNGNNGYLQRHNSLRSKAPALSEFKKRPS-----------------------L 4130
Fly 4131 PNAMDPGT---AAPPRQVYQAPPPPTNISFTYADFPPVRRPQGASAHNYRSQPCLTSAVDQVEAL 4192
Fly 4193 TNPLGAPLVLTSSNPTYLPPPGSRRFDYISSPVDVDADSPPNSPTSFMTMPNPTLMTDNTDDDLD 4257
Fly 4258 LDSDNNMLEYRAETKVMRKPRSQTAVRVADRRNA------HMSDDEVYGKNSRAAKSLLYTMKQL 4316
Fly 4317 GGGPGNASVGNSGQRRQPL--TAPSSPKSGCLSPDGRPYQAPLVEPLFPQ-LSTFEPKRQPQFAN 4378
Fly 4379 SPMSTPPAVSMPSINYQANPTYTPPRSNQNSNSYLGETNTSYVVTYPLDDSGDEPEPESMATSVS 4443
Fly 4444 QRLRRTSEHSNASSSLSLGSTSWTANPV----HNTVPSVPLDSAMGPPVDRSTKPQVSQPVGPKM 4504
Fly 4505 PQHVAQKQIPQQLPNQLPQQIP--QQLPKQL--------PQQIPQQLPQQLPQQLPKQLPQQIPP 4559
Fly 4560 QLPKQLPQQIPQPELPQQLPNNLPRHAPK-----------LSSRSHTIQGDSGYENRPLQNRVMS 4613
Fly 4614 QQTLNSSI----ITSNN------HTTVQKQQKEQHINELRRKSLGNVLESSQRSTYFEQEYKS-S 4667
Fly 4668 APPDTPDIVKSSLPKE------------DAPLLKKFGPPQRHHYMPNSYQSPQLNKQGNSNSTTT 4720
Fly 4721 SSTSVR-------------STTVVQQQHHQQQHQQIKPSIVETPATPQPQVPPEDEIPHNIVFNN 4772
Fly 4773 V-SAFTSMSRRNHEEDSHQGTQSGSRVNRLSKCDS--WNQICQLQQTAG--PSPAKYNQPGSPGE 4832
Fly 4833 LRR-----TKSGHSLAVPKLYEAGIDKAQVSEKQRTVAAYFSGQKSPTGGQVEELRTSMTTTTSS 4892
Fly 4893 RKSAINRT-------KTSEKLSAAARKSLSSLTTTSNGNVS--------TAGLGMVVRGGGVGGI 4942
Fly 4943 GGGAALSRSATMPHIANLNLLDESNVEDAFEQLMMAQH--KSSSSSEQ-----RTETKSKDGGAT 5000
Fly 5001 VTTTTTKVTTRTVS---GSAASKNISPLAKFKQLDKQAAAQQAQKSSPTTSTPTTPGGSAQPLFK 5062
Fly 5063 FTDP-ALNAR--AATVKDQLLQWCKHKTQEYENVQINNFSSSWSDGLAFCALIHHFLPDAFDYTT 5124
Fly 5125 LTKQTRRHNFELAFSVADEKAGIAPLLDVEDMVEMSRPDWKCVFVYVQSIYRRF 5178 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG34417 | NP_001259282.1 | Smoothelin | 2594..2636 | CDD:289290 | |
Smoothelin | 3127..3176 | CDD:289290 | |||
GBP_C | <3810..3882 | CDD:303769 | |||
coiled coil | 3857..3868 | CDD:293879 | |||
CH | 5076..5179 | CDD:237981 | 55/103 (53%) | ||
specc1l | XP_012819429.1 | Smc | <358..789 | CDD:224117 | 85/490 (17%) |
CH | 1003..1103 | CDD:237981 | 54/100 (54%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR23167 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |