DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34417 and Smtnl1

DIOPT Version :9

Sequence 1:NP_001259282.1 Gene:CG34417 / 31591 FlyBaseID:FBgn0085446 Length:5182 Species:Drosophila melanogaster
Sequence 2:NP_077192.1 Gene:Smtnl1 / 68678 MGIID:1915928 Length:459 Species:Mus musculus


Alignment Length:462 Identity:134/462 - (29%)
Similarity:196/462 - (42%) Gaps:118/462 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  4786 EDSHQGTQSGSRVNRLSKCDSWNQICQLQQTAGPSPAKYNQPGSPG------ELRRTKSGHSLAV 4844
            |:..:||...|  ::....|....:|:....:|.|      .||||      ||:....|.:   
Mouse    32 EEVAEGTVGTS--DKEGPSDWAEHLCKAASKSGES------GGSPGEASILDELKTDLQGEA--- 85

  Fly  4845 PKLYEAGIDKAQ-------VSEKQRTVAAY-FSGQK---SPTGGQVEELRTSM------------ 4886
                 .|.|:||       |.::..|.|:. .:|:|   .|...:|.|...:|            
Mouse    86 -----RGKDEAQGDLAEEKVGKEDTTAASQEDTGKKEETKPEPNEVREKEEAMLASEKQKVDEKE 145

  Fly  4887 TTTTSSRKSAIN-RTKTSEKLSAAARKSLSSLTTTSNGNVSTAGLGMVVRGGGVGGIGGGAALSR 4950
            |...|..||.:| :.|...|..|.|..:::...|.|......                      :
Mouse   146 TNLESKEKSDVNDKAKPEPKEDAGAEVTVNEAETESQEEADV----------------------K 188

  Fly  4951 SATMPHIANLN----------LLD-ESNVEDAFEQLMMAQHKSS-------SSSEQRTETKSKDG 4997
            ....|.:..::          |:: ||..|   ||....:::|.       ||.|:..|:.:.:|
Mouse   189 DQAKPELPEVDGKETGSDTKELVEPESPTE---EQEQGKENESEERAAVIPSSPEEWPESPTDEG 250

  Fly  4998 GATVTTTTTKVTTRTVSGSAASKNIS--------PLAKFKQLDKQAAAQQAQKSSPTTSTPTTP- 5053
            .:.........:|...|.||:..:.|        |....|:.|:   |.:.:.|:|  |.|..| 
Mouse   251 PSLSPDGLAPESTGETSPSASESSPSEVPGSPTEPQPSEKKKDR---APERRVSAP--SRPRGPR 310

  Fly  5054 -----------GGSAQ---PLFKFTDPALNARAATVKDQLLQWCKHKTQEYENVQINNFSSSWSD 5104
                       ||:|.   .||:.| .|..|....||:.||:||:..|:.||:|.|.|||||||.
Mouse   311 AQNRKAIMDKFGGAASGPTALFRNT-KAAGAAIGGVKNMLLEWCRAMTRNYEHVDIQNFSSSWSS 374

  Fly  5105 GLAFCALIHHFLPDAFDYTTLTKQTRRHNFELAFSVADEKAGIAPLLDVEDMVEMSRPDWKCVFV 5169
            |:|||||||.|.|:||||..|....|||||.||||.|::.|..|.||:|:|||.::.||.|||:.
Mouse   375 GMAFCALIHKFFPEAFDYAELDPAKRRHNFTLAFSTAEKLADCAQLLEVDDMVRLAVPDSKCVYT 439

  Fly  5170 YVQSIYR 5176
            |:|.:||
Mouse   440 YIQELYR 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34417NP_001259282.1 Smoothelin 2594..2636 CDD:289290
Smoothelin 3127..3176 CDD:289290
GBP_C <3810..3882 CDD:303769
coiled coil 3857..3868 CDD:293879
CH 5076..5179 CDD:237981 59/101 (58%)
Smtnl1NP_077192.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..314 66/327 (20%)
MDN1 <51..229 CDD:227596 41/216 (19%)
PTZ00449 <150..>310 CDD:185628 36/189 (19%)
CH 345..446 CDD:366016 58/100 (58%)
Calmodulin-binding 441..459 3/6 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 134 1.000 Domainoid score I4987
eggNOG 1 0.900 - - E2759_KOG4678
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001328
OrthoInspector 1 1.000 - - otm43286
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4943
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.840

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