Sequence 1: | NP_001259282.1 | Gene: | CG34417 / 31591 | FlyBaseID: | FBgn0085446 | Length: | 5182 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001177927.1 | Gene: | Smtnl2 / 679629 | RGDID: | 1585960 | Length: | 456 | Species: | Rattus norvegicus |
Alignment Length: | 492 | Identity: | 132/492 - (26%) |
---|---|---|---|
Similarity: | 190/492 - (38%) | Gaps: | 138/492 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 4729 TVVQQQHHQQQHQQ-------------IKPSIVETPATPQPQVPPEDEIPHNIVFNNVSAFTSMS 4780
Fly 4781 RRNHEEDSHQGTQSGSRVNRLSKCDSWNQICQLQQTAGPSPAKYNQPGSPGELRRT------KSG 4839
Fly 4840 HSLAVPKLYEAGIDKAQVSEKQRTVAAYFSGQKSPTGGQVE-ELRTSMTTTTSSRKSAINRTKTS 4903
Fly 4904 EKLSAAARKSLSSLTTTSNGNV--------------------STAGLGMVVRGGGVGGIGGGAAL 4948
Fly 4949 SRSATMPHIANLNLLDESNVEDAFEQLMMAQHKSSSSSEQRTETKSKDGGATVTTTTTKVTTRTV 5013
Fly 5014 SGSAASKNISPLAKFKQLDKQAAAQQAQKSSPTTSTPTTPGGSAQPLFKFTDPALNARAATVKDQ 5078
Fly 5079 LLQWCKHKTQEYENVQINNFSSSWSDGLAFCALIHHFLPDAFDYTTLTKQTRRHNFELAFSVADE 5143
Fly 5144 KAGIAPLLDVEDMVEMSR-PDWKCVFVYVQSIYRRFR 5179 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG34417 | NP_001259282.1 | Smoothelin | 2594..2636 | CDD:289290 | |
Smoothelin | 3127..3176 | CDD:289290 | |||
GBP_C | <3810..3882 | CDD:303769 | |||
coiled coil | 3857..3868 | CDD:293879 | |||
CH | 5076..5179 | CDD:237981 | 58/103 (56%) | ||
Smtnl2 | NP_001177927.1 | PRK09039 | <8..>84 | CDD:181619 | 5/24 (21%) |
CH_SMTNL2 | 347..453 | CDD:409110 | 58/105 (55%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 141 | 1.000 | Domainoid score | I4593 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG4678 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001328 | |
OrthoInspector | 1 | 1.000 | - | - | otm45358 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.810 |