DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34417 and specc1la

DIOPT Version :9

Sequence 1:NP_001259282.1 Gene:CG34417 / 31591 FlyBaseID:FBgn0085446 Length:5182 Species:Drosophila melanogaster
Sequence 2:NP_001034905.1 Gene:specc1la / 561775 ZFINID:ZDB-GENE-060810-139 Length:1132 Species:Danio rerio


Alignment Length:874 Identity:204/874 - (23%)
Similarity:336/874 - (38%) Gaps:189/874 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly  4429 SGDEPEPESMATSVSQRLRRTSEHSNASSSLSLGSTSWTANPVHNTVPSVPLDSAMGPPVDRSTK 4493
            ||.....:|.::.|.|.:..:.:..:|.|.....|:|               :|..|||..||:.
Zfish   322 SGSTDNLDSESSEVYQAVTSSDDALDAPSGCGSSSSS---------------ESEGGPPACRSSS 371

  Fly  4494 PQVSQPVGPKMPQHVAQKQIPQQLPNQLPQQIPQQLPKQLPQQIP--QQLPQQLPQQLPKQLPQQ 4556
            .:.|.....::......::|.|...||  ....::|...| |::.  ||:.|:|..:..:...::
Zfish   372 RKGSSGNTSEVSVACLTERIHQMEENQ--HSTSEELQATL-QELADLQQITQELNGENERLGEEK 433

  Fly  4557 IPPQLPKQLPQQIPQPE-LPQQLP---NNLPRHA--------------PKLSSRSHTIQGDSGYE 4603
            :  .|...|.||..:.| ..:|:.   :.|..|.              .:|..|...:..::.:|
Zfish   434 V--LLMDSLCQQSDKLEHCGRQIEYFRSLLDEHGVAYSVDEDIKSGRYMELEQRYVELAENARFE 496

  Fly  4604 NRPLQNRVMSQQTLNSSIITSNNHTTVQK-----QQKEQHINEL------RRKSLGNVLES---- 4653
            ...|..  :.|...|:..:...::...|.     :::..|:..|      .|.|:..|||.    
Zfish   497 REQLLG--VQQHLSNTLKMAEQDNAEAQNVIAALKERNHHMERLLDVERQERASMAAVLEECKAA 559

  Fly  4654 --------SQRSTYFEQE-------YKSSAPPDTPDIVK----SSLPKEDAPL-LKKFGPPQRHH 4698
                    |:.....|||       |......|..||.:    ..|.||:|.. ..|......|.
Zfish   560 VNNDQAELSRCRVLLEQERQKVAELYSIHNAGDKSDIHQLLEGVRLDKEEAEAKASKLQDDLGHA 624

  Fly  4699 YMPNSYQSPQLNK----QGNSNSTTTSSTSVRSTTVVQQQHHQQQHQ----QIKPSIVETPATPQ 4755
            ....:.....|||    ..:..|......:.:...:.:|:...|:.:    .:|.:|.|.     
Zfish   625 RSEVACLQDTLNKLDAEYRDFQSVVQKELAEQKRAIEKQREDLQEKETEIGDMKETIFEL----- 684

  Fly  4756 PQVPPEDEIPH--------NIVFNNVSAFTSMSRRNHEEDSHQGTQSGSRVNRLSKCDS--WNQI 4810
                 |||:..        |::.:::    ..|.:..::..|...:....::|..:.:|  |.|.
Zfish   685 -----EDEVEQHRAVKLHDNLIISDL----ENSMKKLQDQKHDMEREIKILHRRLREESAEWRQF 740

  Fly  4811 CQLQQTAG--PSPAKYNQPGSPGELRR---------TKSGHSLAVPKLYEAGIDKAQV----SEK 4860
            ....|||.  .:..|.......|:|||         .|.|..:...|..:...::.:|    :..
Zfish   741 QADLQTAVVIANDIKSEAQEEIGDLRRRLQEAQEKNEKLGKEIEEVKNRKQDEERGRVYNYMNAV 805

  Fly  4861 QRTVAAYFSG-----------QKSPTGGQVEELRTSMTTTTSSRKSAINRTKTSEKLSAAARKSL 4914
            :|.:||...|           :.|||   |:.|..|.  .::|:....|.|..:...:|||..:.
Zfish   806 ERDLAALRQGMGLSRRPSTSSEPSPT---VKTLIKSF--DSASQGPGANATAVAAAAAAAAAAAA 865

  Fly  4915 SSLTTT-----------SNGNVST---AGLGMVVRGGGVGGIGGGAALSRSATMPHIANLNLLDE 4965
            .::|:|           |...:.|   |.:..:.|....|.:.....||           :|.|:
Zfish   866 VTVTSTTPTAPLPRTPLSPSPMKTPPAAAVSPIQRHSITGSMAAAKPLS-----------SLADK 919

  Fly  4966 ----SNVEDAFEQLMMAQHKSSSSSEQRTETKSKDGGATVTTTTTKVTTRTVS---GSAASKNIS 5023
                :::....|.|:.|.:...:|:.||..........||:..:::...|.:|   |..||..||
Zfish   920 RPSYTDISMPAEHLLRAANSRPASALQRVSNMDTSKTITVSRRSSEEPKRDISTPDGGPASSLIS 984

  Fly  5024 PLAKFKQLDKQAAAQQAQKSSPTTSTPTTPGGSAQPLFKFTDPALNARA----ATVKDQLLQWCK 5084
                     ..:||..:..||||.|...|.....:...|  || |:|.|    .:.::.||:||:
Zfish   985 ---------MSSAAALSSSSSPTASVNPTARSRLREERK--DP-LSALAREYGGSKRNALLRWCQ 1037

  Fly  5085 HKTQEYENVQINNFSSSWSDGLAFCALIHHFLPDAFDYTTLTKQTRRHNFELAFSVADEKAGIAP 5149
            .||:.|:|:.|.||||||:|||||||::|.:||....|..|..|.:|.||.|||..| |..||..
Zfish  1038 KKTEGYQNIDITNFSSSWNDGLAFCAVLHTYLPAHIPYQELNSQDKRRNFTLAFQAA-ESVGIKS 1101

  Fly  5150 LLDVEDMVEMSRPDWKCVFVYVQSIYRRF 5178
            .||:.|||...||||:.|..||.|||:.|
Zfish  1102 TLDINDMVHTERPDWQSVMTYVTSIYKYF 1130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34417NP_001259282.1 Smoothelin 2594..2636 CDD:289290
Smoothelin 3127..3176 CDD:289290
GBP_C <3810..3882 CDD:303769
coiled coil 3857..3868 CDD:293879
CH 5076..5179 CDD:237981 54/103 (52%)
specc1laNP_001034905.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..166
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 301..381 16/73 (22%)
DUF4515 595..791 CDD:291649 38/209 (18%)
SPEC 608..793 CDD:295325 34/198 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 869..895 5/25 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 939..1016 21/87 (24%)
CH 1030..1130 CDD:237981 53/100 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4678
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23167
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

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