| Sequence 1: | NP_001259282.1 | Gene: | CG34417 / 31591 | FlyBaseID: | FBgn0085446 | Length: | 5182 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_030101968.1 | Gene: | Specc1 / 432572 | MGIID: | 2442356 | Length: | 1072 | Species: | Mus musculus |
| Alignment Length: | 1171 | Identity: | 238/1171 - (20%) |
|---|---|---|---|
| Similarity: | 402/1171 - (34%) | Gaps: | 318/1171 - (27%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 4166 RRPQGASAHNY----------RSQPC----LTSA----------------VDQVEALTNPLGAPL 4200
Fly 4201 VLTSSNPTYLP--PPGSRRFDYISSPVDVDADSPPNSPTSFM-TMPNPTLMTDNTDDDLDLDSDN 4262
Fly 4263 NMLEYRAETKVMRKPRSQTAVRVADRRNAHMSDDEVYGKNSRAAKSLLYTMKQLGGGPGNASVGN 4327
Fly 4328 SGQRRQPLTAPSSPKSGCLSPDGRPYQAPLVEPLFPQLSTFEPKRQPQFANSPMSTPPAVSMPSI 4392
Fly 4393 NY-QANPTYTPPRSNQNSNSYLGETNTSYVVTYPLDDSGDEPEPESMATSVSQRLRRTSEHS--- 4453
Fly 4454 ---NASSSLSLGSTSWTANPV-HNT--VPSVPLDSAMGPPVDRSTKPQVSQPVG----------- 4501
Fly 4502 --PKMP--QHVAQKQIP---QQLPNQLPQQIPQQLPKQLPQQIPQQLPQQLPQQLPKQLPQQIPP 4559
Fly 4560 QLPKQLPQQIPQPELPQQLPNNLPRHAPKLSSRSHTIQGDSGYENRPLQNRVMSQQTLNSSIITS 4624
Fly 4625 NNHTTVQ--KQQKEQH--IN---------------------------ELRRKSLGNVLES----- 4653
Fly 4654 -------SQRSTYFEQEYKSSAPPDTPDIVKSSLPKEDAPLLKKFGP-----------PQRHHYM 4700
Fly 4701 PN--SYQSPQLN----KQGNSNSTTTSSTSVRSTTVVQQQHHQQQHQQIK-----------PSIV 4748
Fly 4749 ETP----------ATPQPQVPPEDE--------------IPHNIVFNNVSAFTSMSRRNHEEDSH 4789
Fly 4790 QGTQSGSRVNRLSKCDSWNQICQLQQTAGPSPAKYNQPGSPGELRRTKSGHSLAVPKLYEAGIDK 4854
Fly 4855 AQVSEKQRTVAAYFSGQKSPTGGQVEELRTSMTTTTSSRKSAIN-RTKTSEKLSAAARKS-LSSL 4917
Fly 4918 TTTSNGNVSTAGLGMVVRGGGVGGIGGGAALSRSATMPHIANLNLLDESNVEDAFEQLMMAQHKS 4982
Fly 4983 SSSSEQRTETKSKDGGATVTTTTTKVTTRTVSGSAASKNISPLAKFKQLDKQAAAQQAQKSSPTT 5047
Fly 5048 STPTTPGGSAQPLFKFTDPALNARAATVKDQLLQWCKHKTQEYENVQINNFSSSWSDGLAFCALI 5112
Fly 5113 HHFLPDAFDYTTLTKQTRRHNFELAFSVADEKAGIAPLLDVEDMVEMSRPDWKCVFVYVQSIYRR 5177
Fly 5178 F 5178 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG34417 | NP_001259282.1 | Smoothelin | 2594..2636 | CDD:289290 | |
| Smoothelin | 3127..3176 | CDD:289290 | |||
| GBP_C | <3810..3882 | CDD:303769 | |||
| coiled coil | 3857..3868 | CDD:293879 | |||
| CH | 5076..5179 | CDD:237981 | 49/103 (48%) | ||
| Specc1 | XP_030101968.1 | PHA03307 | 36..>151 | CDD:223039 | 21/96 (22%) |
| Smc | <165..533 | CDD:224117 | 79/427 (19%) | ||
| SMC_prok_B | <372..740 | CDD:274008 | 58/372 (16%) | ||
| PRK00409 | <697..>797 | CDD:234750 | 16/116 (14%) | ||
| CH | 969..1072 | CDD:366016 | 49/103 (48%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR23167 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 2.010 | |||||