DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34417 and Specc1l

DIOPT Version :9

Sequence 1:NP_001259282.1 Gene:CG34417 / 31591 FlyBaseID:FBgn0085446 Length:5182 Species:Drosophila melanogaster
Sequence 2:NP_001034544.1 Gene:Specc1l / 361828 RGDID:1309570 Length:1118 Species:Rattus norvegicus


Alignment Length:1077 Identity:226/1077 - (20%)
Similarity:397/1077 - (36%) Gaps:275/1077 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  4270 ETKVMRKPRSQTAVRVADRRNAHMSDDEVYGKNSRAA--KSLLYTMK------------------ 4314
            :..:.::.||:||.....|.:...||:::..|.:..|  |.||...|                  
  Rat   147 DVALAKRSRSRTATEGDIRMSKSKSDNQISDKAALEAKVKDLLTLAKTKDVEILHLRNELRDMRA 211

  Fly  4315 QLGGGPGNASVGNSGQRRQPLTAPSSPKSGCLSPDGRPYQAPLVEPLFPQL---STFEPKRQPQF 4376
            |||....:....:..:.::.:.|               :|...||....||   :|...:...|.
  Rat   212 QLGISEDHCEGEDRSEEKETIIA---------------HQPTDVESTLLQLQEQNTAIREELNQL 261

  Fly  4377 ANSPMSTPPAV-------------SMPSINYQA-NPTYTPPRSNQNSNSYLGETNTSYVVTYPLD 4427
            .|........:             |.....||: :|..||  .||:..   |.|.||.|      
  Rat   262 KNENRMLKDRLNALGFSLEQRLDNSEKLFGYQSLSPEITP--GNQSDG---GGTLTSSV------ 315

  Fly  4428 DSGDEPEPESMATSVSQRLRRTSEHSNASSSLSLGSTSWTANPVHNTVPSVPLDSAMG----PPV 4488
             .|..|.......|..:......:|||:..:|. ...|....|:.::..::...|:..    |.:
  Rat   316 -EGSAPGSVEDLLSQDENTLMAHQHSNSMDNLD-SECSEVYQPLTSSDDALDAPSSSESEGVPSI 378

  Fly  4489 DRSTK---PQVSQPVGPKMPQHVAQKQIPQQLPNQLPQQIPQQLPKQLPQQIPQQL---PQQLPQ 4547
            :||.|   ...|:.....:.:.:.|.:..|...::..|...|:|...  |||.|:|   .::|.:
  Rat   379 ERSRKGSSGNASEVSVACLTERIHQMEENQHSTSEELQATLQELADL--QQITQELNSENERLGE 441

  Fly  4548 Q---LPKQLPQQIPPQLPKQLPQQIPQPELPQQLPNNLPRHAPKLSSRSHTIQGD--SGYENRPL 4607
            :   |.:.|.||  ....:...:||      :...:.|..|     ..|:.|..|  || ....|
  Rat   442 EKVILMESLCQQ--SDKLEHFGRQI------EYFRSLLDEH-----HISYVIDEDVKSG-RYMEL 492

  Fly  4608 QNRVMS---------QQTLNSSIITSNNHTTVQKQQKE--QHINELRRKS--LGNVLESSQR--- 4656
            :.|.|.         :|.|......||.....::..||  :.|..|:.:|  :..::||.|:   
  Rat   493 EQRYMDLAENARFEREQLLGVQQHLSNTLKMAEQDNKEAQEMIGALKERSHHMERIIESEQKGKA 557

  Fly  4657 ---STYFEQEYKSSAPPDTPDI--VKSSLPKEDAPLLKKFG-------------------PPQRH 4697
               :|.  :|||::...|..::  :|:.|.||...:.:.:.                   ..::.
  Rat   558 ALAATL--EEYKATVASDQIEMNRLKAQLEKEKQKVAELYSIHNSGDKSDIQDLLESVRLDKEKA 620

  Fly  4698 HYMPNSYQSPQLNKQGNSNSTTTSSTSVRSTTVVQQQHHQQQHQQIKPSI------VETPATPQP 4756
            ..:.:|.|....:.:.::|....:...|.......|:..::|.:.:..::      :|...|.:.
  Rat   621 ETLASSLQEDLAHTRNDANRLQDTIAKVEDEYRAFQEEAKKQIEDLNMTLEKLRSELEEKETERS 685

  Fly  4757 QVPP-----EDEIPH--------NIVFNNVSAFTSMSRRNHEEDSHQGTQSGSRVNRLSKCDS-- 4806
            .:..     |||:..        |::.:::    ..:.:..::..|...:....::|..:.:|  
  Rat   686 DMKETIFELEDEVEQHRAVKLHDNLIISDL----ENTVKKLQDQKHDLERENKTLHRRLREESAE 746

  Fly  4807 WNQICQLQQTAG--PSPAKYNQPGSPGELRRTKSGHSLAVPKLYEAGIDKAQVSEK--------- 4860
            |.|.....|||.  .:..|.......|:|:|          :|:||.....:::::         
  Rat   747 WRQFQADLQTAVVIANDIKSEAQEEIGDLKR----------RLHEAQEKNEKLTKELEEIKSRKQ 801

  Fly  4861 --------------QRTVAAYFSG-----------QKSPTGGQVEELRTSMTTTTSSRKSAINRT 4900
                          :|.:||...|           :.:||...:.:...|.:...::..:||.||
  Rat   802 EEERGRVYNYMNAVERDLAALRQGMGLSRRSSTSSEPTPTVKTLIKSFDSASQVPNAAAAAIPRT 866

  Fly  4901 KTSEK---------LSAAARKSLSSLTTTSNGNVSTAGLGMVVRGGGVGGIGG------GAALSR 4950
            ..|..         :|...|.|:|...:||....:.:.     :....|.|.|      .::.||
  Rat   867 PLSPSPMKTPPAAAVSPMQRHSISGPVSTSKPLTALSD-----KRSNYGEIPGQEHLLRTSSTSR 926

  Fly  4951 SATMPHIANLNLLDESNVEDAFEQLMMAQHKSSSSSEQRTETKSKDGGATVTTTTTKVTTRTVSG 5015
            .|::|.:            .|.|..........||.|.:.:..:.:|.:..:......|      
  Rat   927 PASLPRV------------PAMESAKTISVSRRSSEEMKRDISASEGASPASLMAMGTT------ 973

  Fly  5016 SAASKNISPLAKFKQLDKQAAAQQAQKSSPTTSTPTTPGGSAQPLFKFTDPALNARA----ATVK 5076
                   ||             |.:..||||.|  .||...::...:..|| |:|.|    .:.:
  Rat   974 -------SP-------------QLSLSSSPTAS--VTPSTRSRIREERKDP-LSALAREYGGSKR 1015

  Fly  5077 DQLLQWCKHKTQEYENVQINNFSSSWSDGLAFCALIHHFLPDAFDYTTLTKQTRRHNFELAFSVA 5141
            :.||:||:.||:.|:|:.|.||||||:||||||||:|.:||....|..|..|.::.||.|||..|
  Rat  1016 NALLKWCQKKTEGYQNIDITNFSSSWNDGLAFCALLHTYLPAHIPYQELNSQEKKRNFTLAFQAA 1080

  Fly  5142 DEKAGIAPLLDVEDMVEMSRPDWKCVFVYVQSIYRRF 5178
             |..||...||:.:|....||||:.|.:||.:||:.|
  Rat  1081 -ESVGIKSTLDINEMARTERPDWQNVMLYVTAIYKYF 1116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34417NP_001259282.1 Smoothelin 2594..2636 CDD:289290
Smoothelin 3127..3176 CDD:289290
GBP_C <3810..3882 CDD:303769
coiled coil 3857..3868 CDD:293879
CH 5076..5179 CDD:237981 51/103 (50%)
Specc1lNP_001034544.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..50
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..175 7/27 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 294..324 12/41 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 359..391 5/31 (16%)
DUF342 <626..703 CDD:302792 11/76 (14%)
Abhydrolase 852..>969 CDD:304388 24/133 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 916..999 21/122 (17%)
CH 1016..1116 CDD:237981 50/100 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4678
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23167
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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