Sequence 1: | NP_001259282.1 | Gene: | CG34417 / 31591 | FlyBaseID: | FBgn0085446 | Length: | 5182 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_008768481.1 | Gene: | Smtn / 289734 | RGDID: | 1310216 | Length: | 954 | Species: | Rattus norvegicus |
Alignment Length: | 1376 | Identity: | 304/1376 - (22%) |
---|---|---|---|
Similarity: | 453/1376 - (32%) | Gaps: | 527/1376 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 3863 QLQREQLQREQ----LQREQLQREQLQRDQLQLQQ---QQQAAAAVQIERQRRQELERQLRLEQE 3920
Fly 3921 ARFEREERTRLER---EYYEQQLQRQQVERQQQLDRQRQQQEQMERQRRQEMELRLQQQREQAAQ 3982
Fly 3983 VNNFI--HAPQSVFRPIENETQPQPGIYKPIAHKSQPNPAVWKPPTQQSQPPQQSQQHLQPRSAT 4045
Fly 4046 TYSNTPSPSSTATSPIGLPWVAKPKVDNSDFRRKAHHFEERSLRDNIEQQQQPTYPNGNNGYLQR 4110
Fly 4111 HNSLRSKAPALSEFKKRPSLPNAMD--PGTAAPPRQVYQAPPPPTNISFTYADFPPVRRPQGASA 4173
Fly 4174 HNYRSQPCLTSAVDQVEALTNPLGAPLVLTSSNPTYLPPPGSRRFDYISSPV--------DVDAD 4230
Fly 4231 -SPPNSPTSFMTMPNPTLMTDNTDDDLDLDSDNNMLEYRAETKVMRKPRSQTAVRVADRRNAHMS 4294
Fly 4295 DDEVYGKNSRAAKSLLYTMKQLGGGPGNASVGNSGQRRQPLTAPSSPKSGCLSPDGRPYQAPLVE 4359
Fly 4360 PLFPQLSTFEPKRQPQFANSPMSTPPAVSMPSINYQANPTYTPPRSNQNSNSYLGETNTSYVVTY 4424
Fly 4425 PLDDSGDEPEPESMATSVSQRLRRTSEHSNASSSLSLGSTSWTANPVHNTVPSVPLDSAMGPPVD 4489
Fly 4490 RSTKPQVSQP--VGPKMPQHVAQKQIPQQLPNQLPQQIPQQLPKQLPQQIPQQLPQQLPQQLPKQ 4552
Fly 4553 LPQQIPPQLPKQLPQQIPQPELPQQLPNNLPRHAPKLSSRSHTIQGDSGYENRPLQNRVMSQQTL 4617
Fly 4618 NSSIITSNNHTTVQKQQKEQHINELRRKSLGNVLESSQRSTYFEQEYKSSAPPDTPDIVKSSLPK 4682
Fly 4683 EDAPLLKKFGPPQRHHYMPNSYQSPQLNKQGNSNSTTTSSTSVRSTTVVQQQHHQQQHQQIKPSI 4747
Fly 4748 VETPATPQPQVPPEDEIPHNIVFNNVSAFTSMSRRNHEEDSHQGT-QSGSRVNRLSKCDSWNQIC 4811
Fly 4812 QLQQTAGPSPAKYNQPGSPGELRRTKSGHSLAVPK--LYEAGIDKAQVSEKQRTVAAYFSGQKSP 4874
Fly 4875 TGGQVEE-----LRTSMTTTTSSRKS-AINRTKTSEKLSAAARKSLSSLTTT-----SNGNVSTA 4928
Fly 4929 GLGMVVRGGGVGGIGGGAALSRSATMPHIANLNLLDESNVEDAFEQLMMAQHKSSSSSEQRTETK 4993
Fly 4994 SKDGGATVTTTTTKVTTRTVSGSAASKNISPLAKFKQLDKQAAAQQAQKSSPTTS---------- 5048
Fly 5049 ---------TPTTPGGSAQPLFKFTDPALNARAATVKDQLLQWCKHKTQEYENVQINNFSSSWSD 5104
Fly 5105 GLAFCALIHHFLPDAFDYTTLTKQTRRHNFELAFSVADEKAGIAPLLDVEDMVEM-SRPDWKCVF 5168
Fly 5169 VYVQSIYRRFR 5179 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG34417 | NP_001259282.1 | Smoothelin | 2594..2636 | CDD:289290 | |
Smoothelin | 3127..3176 | CDD:289290 | |||
GBP_C | <3810..3882 | CDD:303769 | 7/22 (32%) | ||
coiled coil | 3857..3868 | CDD:293879 | 3/4 (75%) | ||
CH | 5076..5179 | CDD:237981 | 61/103 (59%) | ||
Smtn | XP_008768481.1 | Smoothelin | 1..41 | CDD:289290 | 3/4 (75%) |
Smoothelin | 73..122 | CDD:289290 | 19/77 (25%) | ||
Smoothelin | 602..651 | CDD:289290 | 11/76 (14%) | ||
CH | 839..943 | CDD:237981 | 61/103 (59%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 141 | 1.000 | Domainoid score | I4593 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG4678 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001328 | |
OrthoInspector | 1 | 1.000 | - | - | otm45358 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_107654 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.710 |