DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34417 and Smtnl2

DIOPT Version :9

Sequence 1:NP_001259282.1 Gene:CG34417 / 31591 FlyBaseID:FBgn0085446 Length:5182 Species:Drosophila melanogaster
Sequence 2:NP_808444.1 Gene:Smtnl2 / 276829 MGIID:2442764 Length:456 Species:Mus musculus


Alignment Length:489 Identity:140/489 - (28%)
Similarity:201/489 - (41%) Gaps:131/489 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  4729 TVVQQQHHQQQHQQ-------------IKPSIVETPATPQPQVPP----EDEIPH--NIVFNNVS 4774
            ||.:.|...|:.|.             :...:...|.||.|  ||    .|..|.  ...|::.:
Mouse    59 TVAELQRDNQRLQAQLERLTRQVEALGLATGVSPAPGTPSP--PPAATVTDRAPRLGTARFSSHA 121

  Fly  4775 AFTSMSRRN----HEEDSHQGTQSGSRVNRLSKCDSWNQICQL----QQTAGPSPAKYN-QPGSP 4830
            .| |:|.|:    |:|      .|...|.|.|..      |.|    |..|||:..... |..|.
Mouse   122 TF-SLSGRSPSVEHDE------ASDLEVRRASNS------CILENGHQLDAGPANGSSEVQTSSA 173

  Fly  4831 GELRRTKS-GHSLAVPKLYEAGIDKAQVSEKQRTVAAYFSGQK-----SPTGGQVEELRTSMTTT 4889
            .|..|.:. ..||.:|  ::......:||||       |||:.     |||...:      :...
Mouse   174 QEPPRPRPVSLSLRMP--HQPVTAVTRVSEK-------FSGETSASALSPTSAAI------VGGF 223

  Fly  4890 TSSRKSAINR-TKTSEKLSAAARKSLSSLTTTSNGNVSTAGLGMVVRGGGVGGIGGGAALSRSAT 4953
            |.|...||:. |.:..:.|::..:|||                    |.|.|.:..|   .|..:
Mouse   224 TPSPSEAISPWTPSPTEKSSSFTRSLS--------------------GSGYGAVTAG---KRKDS 265

  Fly  4954 MPHIANLNLLDESNVEDAFEQLMMAQHKSSSSSEQRTETKSKDGGATVTTTTTKVTTRTVSGSAA 5018
            .|                    ::...:|..||:....|::...|..........|....||:.|
Mouse   266 PP--------------------LVTPPQSPPSSQPPAMTQAPRQGERRRELVRSQTLPRTSGAQA 310

  Fly  5019 SKNISPLAKFKQLDKQAAAQQAQKSSPTTSTPTTPGGSAQPLFKFTDPALNARAATVKDQLLQWC 5083
            .|     |.|::.::..|::..              |..:...|.:.....|.|:::|..||:||
Mouse   311 RK-----ALFEKWEQDTASKGK--------------GETRAKLKRSQSFGVASASSIKQILLEWC 356

  Fly  5084 KHKTQEYENVQINNFSSSWSDGLAFCALIHHFLPDAFDYTTLTKQTRRHNFELAFSVADEKAGIA 5148
            :.||..|::|.:.|||||||||:|||||:|.|.||||||..|:...|:.||||||::|:..|...
Mouse   357 RSKTVGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNALSPTQRQKNFELAFTMAENLANCE 421

  Fly  5149 PLLDVEDMVEMSR-PDWKCVFVYVQSIY---RRF 5178
            .|::||||:.|.| ||..|||.||||:|   |||
Mouse   422 RLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRRF 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34417NP_001259282.1 Smoothelin 2594..2636 CDD:289290
Smoothelin 3127..3176 CDD:289290
GBP_C <3810..3882 CDD:303769
coiled coil 3857..3868 CDD:293879
CH 5076..5179 CDD:237981 61/107 (57%)
Smtnl2NP_808444.1 SlyX <56..89 CDD:294687 5/29 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..140 7/26 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 154..190 11/37 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 220..310 23/132 (17%)
CH 349..453 CDD:237981 58/103 (56%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 134 1.000 Domainoid score I4987
eggNOG 1 0.900 - - E2759_KOG4678
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001328
OrthoInspector 1 1.000 - - otm43286
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.810

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