DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34417 and Leo1

DIOPT Version :9

Sequence 1:NP_001259282.1 Gene:CG34417 / 31591 FlyBaseID:FBgn0085446 Length:5182 Species:Drosophila melanogaster
Sequence 2:NP_001034611.1 Gene:Leo1 / 235497 MGIID:2685031 Length:667 Species:Mus musculus


Alignment Length:854 Identity:157/854 - (18%)
Similarity:288/854 - (33%) Gaps:263/854 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  2722 ASPAQKRRISPPGKQSPGDR----STTTTTKVTTTSTTRGAPSKPAQGPIWADRSKVLKGHATVP 2782
            |....:|:.|.....|..|:    |.:..:...:....||...:|:...::.|.|          
Mouse    12 AESEAERKDSESESDSDSDQDNGASGSNASGSESDQDDRGDSGQPSNKELFGDDS---------- 66

  Fly  2783 QTNGSTPRKGSTSSTTSSSGKITRTMTSSSTTTSSSSTTNTRNKQREEDSITSSYGVGPTDENGL 2847
            :..|::...||.:.:..|..:          :.:|..:.:..|:..:||..:.|......|:.  
Mouse    67 EEEGASHHSGSDNHSERSDNR----------SEASERSDHEDNEPSDEDQHSGSEAHNDDDDE-- 119

  Fly  2848 PLFGIRALKKKATPPAEEPCETKQEVTGYVIEEQFYSDNKSPPRHERKELIYSSNAD-ELAAIKQ 2911
               |.|:.:......||...:.:.:      :|::..::||....:.| |..|.:.| |..:.:.
Mouse   120 ---GHRSDEGSRHSEAEGSEKAQSD------DEKWDGEDKSDQSDDEK-LQNSDDEDREQGSDED 174

  Fly  2912 QLQDEDDSSPPLLDARVVREFKKVESQQSLPEDARYVRRGSVKELSEKFIRKESSSSTHSTHSSI 2976
            :||:.||....:              |.:..||...:.....::|||:  .|.:|...|...|. 
Mouse   175 KLQNSDDDEEKM--------------QNTDDEDRAQISDDDRQQLSEE--EKGNSDDEHPVASD- 222

  Fly  2977 AQSLVRHEDETEDDSESNDVCSVIEAPQMRQNQSHTMSTTRSSNTRSFLNSSADQRQVT-----S 3036
                   .||.:.:|:..|...|.:..:|:.:.......:.....||......||:..:     |
Mouse   223 -------NDEEKQNSDDEDQPQVSDEEKMQNSDDERPQVSDEDGRRSDGEEEQDQKSESARGSDS 280

  Fly  3037 VDDVLERMRNADNVEEPGDSSED------REARALLNKFLGASVIMQGVESMLPPTATGQRLNSQ 3095
            .|:|| |::..:.:  |.||..|      ::....::.|.||..|..|.:....|...||.::..
Mouse   281 EDEVL-RLKRKNAI--PSDSEADSDTEVPKDNNGTMDLFGGADDISSGSDGEDKPPTPGQPVDEN 342

  Fly  3096 GVKTTRITNTYSKSGNSTSTTNNTSNTTNKVSSSSAPVTRTTCDIEEIWDEQVLKQLLEQASTYE 3160
            |:                                                               
Mouse   343 GL--------------------------------------------------------------- 344

  Fly  3161 ERRKIRARLRELMAEREEQKNLKQAPKEEKEEEESSASEYEEIIEEV-TDYSDEEE--------E 3216
                                     |::::|||....:..|..|.:| ||..::..        .
Mouse   345 -------------------------PQDQQEEEPIPETRIEVEIPKVNTDLGNDLYFVKLPNFLS 384

  Fly  3217 VPPKKEEPK--KEEVTKKEVTKKEVTTKQQEEIQQKAVKKVEKT---ETKTSQATESVSKKLAKV 3276
            |.|:..:|:  ::|...:|:..:|..|:.:        .|||.|   ..:..:....:.:..|::
Mouse   385 VEPRPFDPQYYEDEFEDEEMLDEEGRTRLK--------LKVENTIRWRIRRDEEGNEIKESNARI 441

  Fly  3277 ELASSSSSSTTDGVQV------------------QGESLPAKAT-KTGATGAAGPVSSSSIGSRK 3322
            ...|..|.|...|.:|                  ||..|..:|. ||..|  ..|.|:.|...||
Mouse   442 VKWSDGSMSLHLGNEVFDVYKAPLQGDHNHLFIRQGTGLQGQAVFKTKLT--FRPHSTDSATHRK 504

  Fly  3323 SSSLSSSQVSTVVRARDKAKPEMMPVAGTGSGSESVPGSGAPNTGSRLSVPSKEDSGTESGEDLR 3387
            .:      :|...|.....|..::|:||.....:            |..:..||:.        |
Mouse   505 MT------LSLADRCSKTQKIRILPMAGRDPECQ------------RTEMIKKEEE--------R 543

  Fly  3388 LLAAGLRDTLQQ-------QSGSDAS--EANRSLVEEVTD---ALSRLESSLKQGKELAVDGGQR 3440
            |.|:..|::.|:       |.|..||  |.:|...||..:   :|:.:::..|        ||.|
Mouse   544 LRASIRRESQQRRMREKQHQRGLSASYLEPDRYDEEEEGEESVSLAAIKNRYK--------GGIR 600

  Fly  3441 QALLGLVARLQSGLSAPEKLAEDRKTDECQKEVETGSPEPDGDSRQSRFA----KRRQRNSRHTV 3501
            :..    ||:.|  |..::.:|:.|.....|..:..|.| :|:|...|.|    |..:::.::.:
Mouse   601 EER----ARIYS--SDSDEGSEEDKAQRLLKAKKLNSDE-EGESSGKRKAEDDDKANKKHKKYVI 658

  Fly  3502 GVSREELAD 3510
            ....||..|
Mouse   659 SDEEEEEDD 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34417NP_001259282.1 Smoothelin 2594..2636 CDD:289290
Smoothelin 3127..3176 CDD:289290 0/48 (0%)
GBP_C <3810..3882 CDD:303769
coiled coil 3857..3868 CDD:293879
CH 5076..5179 CDD:237981
Leo1NP_001034611.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..362 80/496 (16%)
PHA02664 <61..209 CDD:177447 34/195 (17%)
Leo1 375..533 CDD:281933 35/185 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 548..585 10/36 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 602..667 16/71 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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