DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34417 and Micall2

DIOPT Version :9

Sequence 1:NP_001259282.1 Gene:CG34417 / 31591 FlyBaseID:FBgn0085446 Length:5182 Species:Drosophila melanogaster
Sequence 2:NP_777275.2 Gene:Micall2 / 231830 MGIID:2444818 Length:1009 Species:Mus musculus


Alignment Length:1020 Identity:213/1020 - (20%)
Similarity:340/1020 - (33%) Gaps:326/1020 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   466 TSETVEEYDDRDQPTSRVVQKAPTPSYAPPSHSPRQSPAKDFSTHGFPSVRPNKATQEYPSQR-- 528
            :|::.||...:    ..:.|.|..||.|....|| .|||:   |:  |.|:.|:...:.||.:  
Mouse   122 SSDSTEELSGK----KGLSQPAKLPSPAQTQRSP-LSPAR---TN--PVVQRNEGGSQRPSPKAA 176

  Fly   529 PGIAGEEVVVVRSEKSRQV--------------------KQQTSSQRTIETEVVGDDYQEP---- 569
            ||.||..|..:.....:.|                    ||.:|:..:......|    ||    
Mouse   177 PGTAGSSVSSICGVCGKHVHLVQRHLADGRLYHRSCFRCKQCSSTLHSGAYRATG----EPGVFV 237

  Fly   570 --QRSPQKLREAPTPSWEQPATRRQPVEEDFSTHGFPSVRTTTTSTRP-------DQPDGEVLHT 625
              ..|.:....:|..|   ....|:|             ...|..|||       .:.:||....
Mouse   238 CTHHSSEVTSVSPKSS---NLASRKP-------------GGVTADTRPFGVSWTVQEANGEGTPL 286

  Fly   626 SKTVSRNQSANRKTNTERIIETQVEHPNAPSHSTPRSGSPRRSQPRDDYASSPRGPAGKPSQSRP 690
            ....:..:.|...|..:..::|:::   .||.|....||          ::.|:.|.        
Mouse   287 RVRTAAWEHAGGNTTAKGFVQTELK---PPSTSQVHVGS----------SAGPKLPT-------- 330

  Fly   691 SNTGGSTTTKTTTTSEPLTRRQLQKEREVDAAHRAFAASLRSSSPADSTTSVGSHHQTPRSSVSS 755
                 .|.|.|:.||:.||             |...::.:..||||.|  |..:.:..|..|.|:
Mouse   331 -----ITVTTTSVTSKALT-------------HVTNSSPIGWSSPAQS--SPANFNSRPVVSPSA 375

  Fly   756 NRTFRREMREGSHDSQAP-------SESSRISSTTVTRHTTGGNVTSNTIKTKTTKPVKTASEPR 813
            ..|.    ..||....|.       :.:|..|:|.||...     ||:..||:..:.....:.|.
Mouse   376 RNTH----LPGSQGQTASKGVKTQLNLNSESSNTAVTPAW-----TSSASKTQQAREKFFQTPPS 431

  Fly   814 SPTPKAGGSVTTTTTTITTKSSPSPAPAS--PTTAAPPTS-------APASSAPPDNKLSQYTYT 869
            :|.|               .|:|:|||.|  ||....|||       ||.|..|     :..|..
Mouse   432 APAP---------------ASAPAPAPTSKVPTVVTVPTSKVPNVVTAPTSKVP-----TVVTVP 476

  Fly   870 TTKPGDIFSLPPTTPPTINNEPT--LTTTRNTTTTTTTTTTATSDNLQNHP--KKSAIEPATD-- 928
            |:|...:.|.|.:..||:.:.||  :.|..|:|.:..||..       |.|  |...:..||:  
Mouse   477 TSKVPTVVSAPTSKVPTVVSAPTSKVPTVVNSTNSRVTTVV-------NAPTSKVPTVVSATNGR 534

  Fly   929 --------TDSQPIRKVKLSANEAKVVEEAPCVRRQYYQL--------------GNEGENPETPE 971
                    |...| ..:..||::...|.:||.......|.              |.:..|...|.
Mouse   535 VPTVVTAHTGRVP-AVMNTSASKVSPVVDAPAQESSREQALSVLRKALPALTGSGTQAPNRSFPA 598

  Fly   972 SSGT----PANKKPHQMRRPHDE--------P------EPQ-----------LRRSSKSPSVEPR 1007
            :|..    |.|:.|.::  |.|:        |      ||.           |:...||||:.||
Mouse   599 TSSVLVTLPKNEVPQKV--PSDKLSALTTQTPNFTIKLEPSAPVNVGNTAVFLQAGKKSPSISPR 661

  Fly  1008 QVQRETTFEGRRVSQDREISIDELILIEETSGAPGSPKIPSPRAQSPGKPATRSQSPE------K 1066
            ..:   |..|.|..             .|.:|..|    |.|.:|.     .:.:.||      |
Mouse   662 VGK---TSVGSRPQ-------------AEVAGVKG----PGPISQE-----GQEEGPEGWRARLK 701

  Fly  1067 PQPRATPR-QSPEKEQPAFKQTHEVYTPSQPEKQFPRARSPEKTPGWTQPQVSPRQSPEKQLPRA 1130
            |..:.||. :|.|:::|...:      |...:.....:.|.:.:...|...:..::.|   .|..
Mouse   702 PVDKKTPAGRSLEQKEPVLAE------PRIGDTSRKASSSSDSSVHITLTSIQHKRKP---CPAG 757

  Fly  1131 QSPEKVPAVRQPSVSPRQS----PEKQI------PDPKTRDQG---------------------- 1163
            ..|.  ||...||.|.|:.    |...:      |:||.::.|                      
Mouse   758 SGPS--PAALSPSPSHRKKLAVPPSLDVSADWLQPEPKKQEDGTRSCKEEKSPTRWSRERSAVLD 820

  Fly  1164 -----PGLPRISPRQSPEKQLPKDVPQKSRQSPEKDLTNQQRREEEIFRSTITTTQKRTTNNLNE 1223
                 ||....||.:.....:|::..|:..|..|..|...:.|..|:.:.........:.::|..
Mouse   821 SGLAPPGEAVTSPVRLHPDYIPQEELQRQLQDIESQLDALELRGVELEKRLRAAEGDASEDSLMV 885

  Fly  1224 EFITNERDNQNQPISEKKPQIPANAEPNTK-PSETIESPDGGFPSKTTEVEAQPEVKESPTYRKK 1287
            ::.        :.|.||:..:...:|...| ..:.:|........:...:..:||..:||..|::
Mouse   886 DWF--------RLIHEKQLLLRLESELMYKSKDQRLEEQQLDLQGELRRLMDKPEGLKSPQDRQR 942

  Fly  1288 GLTRRE-------TFEDRCRQILGMEEDGDTQGTYTERPNNEQED 1325
               .:|       |..||...:..::||         |...::||
Mouse   943 ---EQELLSQYVNTVNDRSDIVDFLDED---------RLREQEED 975

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34417NP_001259282.1 Smoothelin 2594..2636 CDD:289290
Smoothelin 3127..3176 CDD:289290
GBP_C <3810..3882 CDD:303769
coiled coil 3857..3868 CDD:293879
CH 5076..5179 CDD:237981
Micall2NP_777275.2 Forms an intramolecular interaction with the C-terminal coiled coil domain keeping the protein in a closed conformation 1..260 35/154 (23%)
CH 5..102 CDD:278723
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..180 21/67 (31%)
LIM_Mical_like_1 188..241 CDD:188828 7/56 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 247..268 5/36 (14%)
Mediates targeting to the cell plasma membrane 261..805 145/659 (22%)
Necessary and sufficient for interaction with actinins 261..393 37/176 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 348..447 31/124 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 655..834 43/214 (20%)
Forms an intramolecular interaction with the N-terminal Calponin-homology and LIM zinc-binding domains-containing region keeping the protein in a closed conformation 806..913 17/114 (15%)
DUF3585 842..978 CDD:288945 28/154 (18%)
Mediates interaction with RAB13 and is required for transition from the closed to the open conformation 913..1009 15/75 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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