DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34417 and SMTNL1

DIOPT Version :9

Sequence 1:NP_001259282.1 Gene:CG34417 / 31591 FlyBaseID:FBgn0085446 Length:5182 Species:Drosophila melanogaster
Sequence 2:NP_001099035.2 Gene:SMTNL1 / 219537 HGNCID:32394 Length:494 Species:Homo sapiens


Alignment Length:502 Identity:134/502 - (26%)
Similarity:197/502 - (39%) Gaps:132/502 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  4746 SIVETPAT---PQPQVPPEDEIPHNIVFNNVSAFTSMSRRNHEEDSHQGTQSGSRVNRLSKCDSW 4807
            :|.|.|.|   .|.:.|.||.:...:                     ||..:|     |.:....
Human    41 AINEGPPTESGKQEKAPAEDGMSAEL---------------------QGEANG-----LDEVKVE 79

  Fly  4808 NQICQLQQTAGPSPAKYNQPGSPGELRRTKSGHSLAVPKLYEAGIDKAQVSEKQRTVAAY----- 4867
            :|    ::..|...|:.......||...|..|......:..|...:..:..||:.|:|:.     
Human    80 SQ----REAGGKEDAEAELKKEDGEKEETTVGSQEMTGRKEETKSEPKEAEEKESTLASEKQKAE 140

  Fly  4868 ------FSGQKSPTGG----------QVEELRTSMTTTTSSRKSAINRTK---TSEKLSAAARKS 4913
                  .||||:....          :.|:.:|:....|..||......|   |.|:..|.::|:
Human   141 EKEAKPESGQKADANDRDKPEPKATVEEEDAKTASQEETGQRKECSTEPKEKATDEEAKAESQKA 205

  Fly  4914 LSSLTTTSNGNVSTAGLGMVVRGGGVGGIGGGAALSRSATMPHIANLNLLDESNVEDAFEQLMMA 4978
            :          |............|......||.                :|::.::..|....|
Human   206 V----------VEDEAKAEPKEPDGKEEAKHGAK----------------EEADAKEEAEDAEEA 244

  Fly  4979 QHKSSSSSEQRTETKSKDGGATVTTTTTKVTTRTVSGSAASKNISPLAKFKQLDKQAAAQ---QA 5040
            :..|.|..:::...|..:|||.|..::.:....:.:|...:.:...|..    |..|:.|   .|
Human   245 EPGSPSEEQEQDVEKEPEGGAGVIPSSPEEWPESPTGEGHNLSTDGLGP----DCVASGQTSPSA 305

  Fly  5041 QKSSPT-----------------------TSTPTTP---------------GGSAQ---PLFKFT 5064
            .:|||:                       .|.|..|               ||:|.   .||:.|
Human   306 SESSPSDVPQSPPESPSSGEKKEKAPERRVSAPARPRGPRAQNRKAIVDKFGGAASGPTALFRNT 370

  Fly  5065 DPALNARAATVKDQLLQWCKHKTQEYENVQINNFSSSWSDGLAFCALIHHFLPDAFDYTTLTKQT 5129
             .|..|....||:.||:||:..|::||:|.|.|||||||.|:|||||||.|.||||||..|....
Human   371 -KAAGAAIGGVKNMLLEWCRAMTKKYEHVDIQNFSSSWSSGMAFCALIHKFFPDAFDYAELDPAK 434

  Fly  5130 RRHNFELAFSVADEKAGIAPLLDVEDMVEMSRPDWKCVFVYVQSIYR 5176
            |||||.||||.|::.|..|.||||:|||.::.||.|||:.|:|.:||
Human   435 RRHNFTLAFSTAEKLADCAQLLDVDDMVRLAVPDSKCVYTYIQELYR 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34417NP_001259282.1 Smoothelin 2594..2636 CDD:289290
Smoothelin 3127..3176 CDD:289290
GBP_C <3810..3882 CDD:303769
coiled coil 3857..3868 CDD:293879
CH 5076..5179 CDD:237981 61/101 (60%)
SMTNL1NP_001099035.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..348 64/366 (17%)
2A1904 <19..278 CDD:273344 52/292 (18%)
CH 380..481 CDD:366016 60/100 (60%)
Calmodulin-binding. /evidence=ECO:0000250 476..494 3/6 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 136 1.000 Domainoid score I4923
eggNOG 1 0.900 - - E2759_KOG4678
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001328
OrthoInspector 1 1.000 - - otm41222
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4943
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.840

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