Sequence 1: | NP_001259282.1 | Gene: | CG34417 / 31591 | FlyBaseID: | FBgn0085446 | Length: | 5182 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017946933.1 | Gene: | specc1 / 100380013 | XenbaseID: | XB-GENE-956924 | Length: | 1057 | Species: | Xenopus tropicalis |
Alignment Length: | 1188 | Identity: | 237/1188 - (19%) |
---|---|---|---|
Similarity: | 392/1188 - (32%) | Gaps: | 369/1188 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 4167 RPQGASAHNYRSQPCLTSAVDQVEALTNPLGAPLVLTSSN------------------PTYLPPP 4213
Fly 4214 GSRRFDYISSPVDVDA------DSPPNSPTSFMTMPNPTLMTDNTDD----DLDLD--------- 4259
Fly 4260 -SDNNMLEYRAETKVMRKPRSQT---------AVRVADRRNAHMSDDE----------------- 4297
Fly 4298 -VYGKNSRAAKSLLYTMKQLGGGPGNASVGNSGQRRQPLTAPS-----------SPKSG----CL 4346
Fly 4347 SP--------DGRPYQAPLVEPLFPQLSTFEPKRQPQFANSPMSTPPAVSMPSINYQANPTYT-- 4401
Fly 4402 -PPRSNQNSNSYLGETNTSYVVTYPLDDSGDEPEPESMATSVSQRLRRTSEHSNASSSLSLGSTS 4465
Fly 4466 WTANPVHNTVPSVPLDSAMGPPVDRSTKPQVSQPVGPKMPQHVAQKQIPQQLPNQLPQQIPQQ-- 4528
Fly 4529 ----LPKQLPQQIPQQLPQQLPQ------------QLPKQLPQQIPPQLPKQLPQQIPQPELPQQ 4577
Fly 4578 LPNNLPRHAPKLSSRSHTIQGDSGYENRPLQNRVMSQQTLNSSIITSNNHTTVQKQQKEQHINEL 4642
Fly 4643 RRKSLGNVLESSQRSTYFEQEYKSS-APPDTPDIVKSSLPKE--------------------DAP 4686
Fly 4687 LLKKFGPPQRHHYMPNSYQSPQLNKQGNSNSTTTSSTSVRSTTVVQQQHHQQQHQQIKPSIVETP 4751
Fly 4752 ATPQPQVPPEDEIPHNIVFNNVSAFTSMSRRNHEEDSHQGTQSGSR-VNRLSKCDS--WNQI--- 4810
Fly 4811 ------------CQLQQTAGPSPAKYNQPGSPGELRRTKSGHSLAVPKLYEAGIDKAQVSEKQRT 4863
Fly 4864 VAAY-----FSGQKSPTGGQVEELRTSMTTTTSSRKSAINRTKTSEKLSAAARKSLSSLTTTSNG 4923
Fly 4924 NVSTAGLGMVVRGGGVG--------------GI----GGGAALSRSATMPHIANLNLLDESNVED 4970
Fly 4971 AFEQLMMAQHKSSSSSE---QRTETKSKDGGATVTTTTTKVTTRTVSGSAASKNISPLAKFKQLD 5032
Fly 5033 KQA--AAQQAQKSSPTTSTPTTPGGSAQPLFKFTDPALNARAATVKDQLLQWCKHKTQEYENVQI 5095
Fly 5096 NNFSSSWSDGLAFCALIHHFLPDAFDYTTLTKQTRRHNFELAFSVADEKAGIAPLLDVEDMVEMS 5160
Fly 5161 RPDWKCVFVYVQSIYRRF 5178 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG34417 | NP_001259282.1 | Smoothelin | 2594..2636 | CDD:289290 | |
Smoothelin | 3127..3176 | CDD:289290 | |||
GBP_C | <3810..3882 | CDD:303769 | |||
coiled coil | 3857..3868 | CDD:293879 | |||
CH | 5076..5179 | CDD:237981 | 51/103 (50%) | ||
specc1 | XP_017946933.1 | DUF641 | <157..195 | CDD:368160 | 4/37 (11%) |
DUF4670 | <380..544 | CDD:374040 | 27/187 (14%) | ||
SMC_prok_B | 468..>780 | CDD:274008 | 59/381 (15%) | ||
CH | 954..1057 | CDD:366016 | 51/103 (50%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR23167 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |