DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dx and dtx4

DIOPT Version :9

Sequence 1:NP_511064.2 Gene:dx / 31589 FlyBaseID:FBgn0000524 Length:738 Species:Drosophila melanogaster
Sequence 2:XP_004910945.2 Gene:dtx4 / 100498075 XenbaseID:XB-GENE-996046 Length:833 Species:Xenopus tropicalis


Alignment Length:893 Identity:210/893 - (23%)
Similarity:324/893 - (36%) Gaps:269/893 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 VCVWEFESRGKWLPYSPAVSQHLERA--HAKKLTRVMLSDADPSLEQYYVNVRTMTQESEAETAG 108
            |.|||::....|.||||.|:.::|:.  ...:.:.|.|.:|||||..|.:::.:|.|    ....
 Frog     7 VVVWEWQDAAFWKPYSPQVTCYVEKVIHETPRASSVSLGEADPSLTSYILDLISMNQ----FRLD 67

  Fly   109 SGLLTIGVRRMFYAPSSPAGKGTKWEWSGGSADSN-NDWRPYNMHVQCIIEDAWARGEQTLDLCN 172
            :|:| ..|||:.:...|..|:|..||     .:.| ..|.|:...:..:|..|:.|.:     ..
 Frog    68 TGIL-FSVRRVIFPLCSAPGQGVTWE-----REVNPTQWVPFETRLSVLIHQAFERKQ-----LG 121

  Fly   173 THIGLPYT---INFCNLTQLRQPSGPMRSIRRTQQAPYPLVKL---------------------- 212
            ..:|.|.|   |.|..:|||..||.....:|....:||||:|:                      
 Frog   122 VRLGEPCTGSHICFQTMTQLEFPSQKRVRVRARTHSPYPLLKIKCGIEKSHFITGYSNRIRNSKK 186

  Fly   213 ---------------------TPQQANQLKSNSAS-VSSQYNT----LPKLGDTKSLHRVPMTRQ 251
                                 .|..:...:||..| :||..||    :.:.|...:|:....|.:
 Frog   187 ETLILNLMHGNPSNGPSFGHEKPSSSEPYRSNQKSAISSLQNTNQVLVNETGGVNNLNTYEFTNR 251

  Fly   252 Q----HP------------------LPTSHQVQQQQHQHQHQQQQQQQHHHQHQQQQHQQQQQHQ 294
            :    :|                  ||.::.:....|..   ......:.|...:..:...:|..
 Frog   252 ETEVINPSCLPFNFSNGLVNVCTSSLPCNNNLINGNHVF---LSSNNNYMHSTARLLNSDDEQSN 313

  Fly   295 MQHHQIHHQTAPRKPPKKHSEISTTNLRQILNNLN--IFSSSTKHQSNMSTAASASSSSSSASLH 357
            .|......:|                   ||.|||  :.:|..|.:|:....||.|....:   :
 Frog   314 CQFRAFSPRT-------------------ILPNLNPALINSDGKSKSSSREIASISGGVPN---N 356

  Fly   358 HANHLSHAHFSHAKNML----------TAS-----MNSHHS---------RCSEGSLQSQRSSRM 398
            .||.:|....|.::|:|          ||.     :||...         |.:.|:...|...|.
 Frog   357 LANSVSEPFVSDSRNVLKPRILRSDIKTADCRVEIINSESKLTNNNPFLVRSNTGTGLCQPDFRP 421

  Fly   399 GSHRSRSRTRTSDTDTNSVKSHRRRPSVDTVSTYLSHESKESLRSRNFAISVNDL---------- 453
            ...:.:....:|..:.:.:|..|.....|.        |..:|...|:..|.|.|          
 Frog   422 VDFKPQFVRLSSIPNDSCIKPTRPDSETDV--------SNPALNRSNYRHSANQLIYGKSDSRYA 478

  Fly   454 -----LDCSLGSDEV--------FVPSLPPSSLGERAPVPPPLPLH-------PRQQQQQQQQQQ 498
                 ||.|.....|        ||...||      .|.|..:.:|       |..|...:....
 Frog   479 DANYILDTSDDPKHVAKNSNAMPFVIQSPP------CPCPQCVLVHNIKSYRWPTHQLSTKTIGI 537

  Fly   499 QLQMQQQQQAQQQQ-----------------QQSIAG------SIVGVD-----PAS-------- 527
            |....|:.:|.:.:                 |.::||      |..|:.     |:|        
 Frog   538 QKSNSQRTEAAKGRTRILPLPLCNIKGSGMIQPALAGISGLLMSSAGLPVCLSIPSSPVFYPPTI 602

  Fly   528 ---------------------------DMISRFVKVVEPPLWPNAQPCPMCMEELVHSAQNPAIS 565
                                       .:|.:|::.|:.||   .:.|.:|::.|   |......
 Frog   603 RKKDIQPVPGVLGTCRKVCNKKGKKPEQVIKQFLQRVKIPL---MEDCILCLKPL---ANGEVGK 661

  Fly   566 LSRCQHLMHLQCLNGMIIAQQNEMNKNLFIECPVCGIVYGEKVGNQPIGSMSWSIISKNLPGHEG 630
            |.||.|..|::||        ..:.|:..:.||.|..:||.|:|:||.|.|.:.:|..:||||..
 Frog   662 LYRCCHSHHVRCL--------AHLYKDGILRCPSCQTLYGSKIGSQPPGKMCYHLIPYSLPGHAD 718

  Fly   631 QNTIQIVYDIASGLQTEEHPHPGRAFFAVGFPRICYLPDCPLGRKVLRFLKIAFDRRLLFSIGRS 695
            ..||:|:|.|:.|:|....|:||..|....||..||||:...||||||.|..|::||:||.:..|
 Frog   719 CQTIRIIYHISPGIQGPGQPNPGTKFTVPDFPLHCYLPNTDKGRKVLRLLIQAWERRILFPVIPS 783

  Fly   696 VTTGREDVVIWNSVDHKTQFNM------FPDPTYLQRTMQQLVHLGVT 737
            ...|..|.|..:...|||:|..      |||..||...::||...|||
 Frog   784 KVPGIPDSVSISRFPHKTEFGSNLTGKGFPDSQYLDSVLRQLQDWGVT 831

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dxNP_511064.2 WWE 47..126 CDD:128922 25/80 (31%)
WWE 133..209 CDD:128922 21/79 (27%)
RING 548..600 CDD:238093 14/51 (27%)
Deltex_C 609..735 CDD:193607 54/131 (41%)
dtx4XP_004910945.2 WWE 8..76 CDD:367204 23/72 (32%)
WWE 89..152 CDD:367204 18/72 (25%)
RING_Ubox 646..698 CDD:388418 18/62 (29%)
Deltex_C 697..830 CDD:387582 54/132 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 139 1.000 Domainoid score I4750
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 274 1.000 Inparanoid score I2901
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D271375at33208
OrthoFinder 1 1.000 - - FOG0001598
OrthoInspector 1 1.000 - - otm48267
Panther 1 1.100 - - O PTHR12622
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1153
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

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