DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL7A and snu13a

DIOPT Version :9

Sequence 1:NP_001284944.1 Gene:RpL7A / 31588 FlyBaseID:FBgn0014026 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_956606.1 Gene:snu13a / 393282 ZFINID:ZDB-GENE-040426-879 Length:128 Species:Danio rerio


Alignment Length:86 Identity:29/86 - (33%)
Similarity:44/86 - (51%) Gaps:6/86 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 PLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLP 176
            |||.....|.|.:...:..:.:..:|      |.|..||.:.:..::.:|:|.|.:|||::|.||
Zfish    12 PLADATLSKTILDLVQQAANYKQLRK------GANEATKTLNRGISEFIVMAADAEPLEIILHLP 70

  Fly   177 ALCRKMGVPYCIVKGKARLGR 197
            .||....|||..|:.|..|||
Zfish    71 LLCEDKNVPYVFVRSKQALGR 91

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL7ANP_001284944.1 PTZ00365 18..271 CDD:240382 29/86 (34%)
Ribosomal_L7Ae 37..257 CDD:294400 29/86 (34%)
snu13aNP_956606.1 Rpl7Ae 9..103 CDD:224277 29/86 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1358
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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