DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL7A and CG13096

DIOPT Version :9

Sequence 1:NP_001284944.1 Gene:RpL7A / 31588 FlyBaseID:FBgn0014026 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_001285757.1 Gene:CG13096 / 34183 FlyBaseID:FBgn0032050 Length:681 Species:Drosophila melanogaster


Alignment Length:246 Identity:60/246 - (24%)
Similarity:89/246 - (36%) Gaps:90/246 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VKKPRPKKKP-VTKK----------------------VAPAPLAVKK---------PVVKKVVNQ 35
            |||...||:| |:||                      .||||.|.|.         ||.||:.  
  Fly    54 VKKDAIKKEPEVSKKGAEKKQSKAAKRPLILAPPESPAAPAPAAKKSKAKPAASGAPVGKKIE-- 116

  Fly    36 LFEKRPKNFGIGQN-VQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVP-------PPIHQFSQT- 91
              .|:|......:: |.||:...:....|  ::.:::.|..:|.::.|       |...:..|| 
  Fly   117 --AKKPLILAPPESPVPPKKQEKKTKAAP--VKAKKEPAPAKKSVQDPVPSIKKVPAAKKSGQTA 177

  Fly    92 -LDKTTA--------------------VKLFKLLEKY-RPESPLAKKLRLKKIAEAKAKGKDV-- 132
             |.|.||                    .|..|.::|. :|.||...|..|.|....:|||..|  
  Fly   178 ALTKKTAKTEKQAAPAKPAKAQPASQLQKKAKAVQKLSKPASPPKSKKALSKSKPGQAKGNAVNK 242

  Fly   133 EP--KKKPSYVS--------------AGTNTVTKLIEQKKAQLVVIAHDVD 167
            ||  .|||..::              ...|.|||:....|:   |::.:|:
  Fly   243 EPAKSKKPVELTFELKAFDEKRFHEIVNENNVTKVCAALKS---VVSEEVE 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL7ANP_001284944.1 PTZ00365 18..271 CDD:240382 51/208 (25%)
Ribosomal_L7Ae 37..257 CDD:294400 41/180 (23%)
CG13096NP_001285757.1 Ribosomal_L1 285..499 CDD:279077 1/6 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23105
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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