DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL7A and Rpl7a

DIOPT Version :9

Sequence 1:NP_001284944.1 Gene:RpL7A / 31588 FlyBaseID:FBgn0014026 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_038749.1 Gene:Rpl7a / 27176 MGIID:1353472 Length:266 Species:Mus musculus


Alignment Length:265 Identity:180/265 - (67%)
Similarity:215/265 - (81%) Gaps:1/265 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PK-KKPVTKKVAPAPLAVKKPVVKKVVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQ 71
            || ||...|||||||..|||...|||||.|||||||||||||::||||||:|||:||:|||:|||
Mouse     2 PKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQ 66

  Fly    72 KAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKK 136
            :|:|.|||||||.|:||:|.||:.||.:|.||..|||||:...||.||...||.||.||...|.|
Mouse    67 RAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTK 131

  Fly   137 KPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRR 201
            :|..:.||.||||.|:|.||||||||||||||:|||:|||||||||||||||:|||||||.||.|
Mouse   132 RPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGHLVHR 196

  Fly   202 KTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKSLARISKLERAKAREL 266
            |||||:|.|.|::.||....|::||::||:|:|::||||||||.:||.||:|||:|||:|||:||
Mouse   197 KTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKEL 261

  Fly   267 AQKQG 271
            |.|.|
Mouse   262 ATKLG 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL7ANP_001284944.1 PTZ00365 18..271 CDD:240382 172/252 (68%)
Ribosomal_L7Ae 37..257 CDD:294400 149/219 (68%)
Rpl7aNP_038749.1 PTZ00365 16..266 CDD:240382 169/249 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833546
Domainoid 1 1.000 166 1.000 Domainoid score I3875
eggNOG 1 0.900 - - E1_COG1358
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 365 1.000 Inparanoid score I2148
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54180
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000860
OrthoInspector 1 1.000 - - otm42759
orthoMCL 1 0.900 - - OOG6_101259
Panther 1 1.100 - - LDO PTHR23105
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1145
SonicParanoid 1 1.000 - - X505
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.790

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