DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL7A and rpl8

DIOPT Version :9

Sequence 1:NP_001284944.1 Gene:RpL7A / 31588 FlyBaseID:FBgn0014026 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_595832.1 Gene:rpl8 / 2540517 PomBaseID:SPBC29A3.04 Length:259 Species:Schizosaccharomyces pombe


Alignment Length:253 Identity:144/253 - (56%)
Similarity:180/253 - (71%) Gaps:4/253 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PVTKKVAPAPLAVKKPVVKKVVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQ 76
            |.:|||||:|.|..| ..|...|.||..||::|||||::||||||||||:||:|||:||::.:|.
pombe     3 PKSKKVAPSPFAQPK-AAKTTKNPLFVSRPRSFGIGQDIQPKRDLSRFVKWPEYIRLQRRRKILN 66

  Fly    77 KRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEP-KKKPSY 140
            .||||||.|.||.:||||.||.::||||.|||||:...||.||...|||.|.||..:. .|||..
pombe    67 LRLKVPPAIAQFQKTLDKNTATQVFKLLNKYRPETAAEKKQRLVAEAEAVANGKSAQDVSKKPYN 131

  Fly   141 VSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCT 205
            |..|.|.|..|||.|||:||:||.||||:|||:||||||:||||||.|||.|||||.::.:||..
pombe   132 VKYGLNHVVALIEAKKAKLVLIASDVDPIELVVFLPALCKKMGVPYAIVKNKARLGTVIHQKTAA 196

  Fly   206 TLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKSLARISKLERAKA 263
            .||:|.|...||.....::.||..||:.:::|.||.|||||:|.|:.|.::|  ||||
pombe   197 VLAVTEVREEDKNELASIVSAVDANFSAKYDESRRKWGGGIMGGKTQALLAK--RAKA 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL7ANP_001284944.1 PTZ00365 18..271 CDD:240382 140/247 (57%)
Ribosomal_L7Ae 37..257 CDD:294400 127/220 (58%)
rpl8NP_595832.1 PTZ00365 1..243 CDD:240382 138/240 (58%)
Ribosomal_L7Ae 2..235 CDD:294400 132/232 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 141 1.000 Domainoid score I1199
eggNOG 1 0.900 - - E1_COG1358
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 276 1.000 Inparanoid score I689
OMA 1 1.010 - - QHG54180
OrthoFinder 1 1.000 - - FOG0000860
OrthoInspector 1 1.000 - - oto100761
orthoMCL 1 0.900 - - OOG6_101259
Panther 1 1.100 - - LDO PTHR23105
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1145
SonicParanoid 1 1.000 - - X505
TreeFam 1 0.960 - -
1312.860

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