DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL7A and Rpp38

DIOPT Version :10

Sequence 1:NP_511063.1 Gene:RpL7A / 31588 FlyBaseID:FBgn0014026 Length:271 Species:Drosophila melanogaster
Sequence 2:XP_030105367.1 Gene:Rpp38 / 227522 MGIID:2443607 Length:350 Species:Mus musculus


Alignment Length:231 Identity:49/231 - (21%)
Similarity:84/231 - (36%) Gaps:58/231 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KVAPAPLAVKKPVVKKVVNQLFEKRPKNFGIGQNVQPKRDLSR--FVRWPKYIRVQRQKAVLQKR 78
            |:|.||.|.|:..::|.       ||        :..|..|:.  .:.|          :.|::.
Mouse    70 KMAAAPQAPKRGSIRKT-------RP--------LVVKTSLNNPYVISW----------STLERE 109

  Fly    79 LKVPPPIHQFSQTLDKTTAVKLFKLL-------EKYRPESPLAKKLRLKKIAEAKAKGKDVE--- 133
                 .||...|||:..     |||:       :|.|.::.|.||...:...|.....|:.:   
Mouse   110 -----DIHFILQTLEAK-----FKLIGLQKIEDKKKRKKTALMKKQSCRPDIEISEDPKEPDGDV 164

  Fly   134 ------PKKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYC-IVKG 191
                  |......:..|.|.||:.:|:.:..||::...|.|..:...|..|.....||.| :.:.
Mouse   165 LVSGWTPVHVRKQLVIGVNEVTRALERNELLLVLVCKSVKPAIITSHLIQLSLSRTVPACQVPQL 229

  Fly   192 KARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAV 227
            ..|:..::..|....|..    ..:..:|...:||:
Mouse   230 SERIAPVIGLKCVLALGF----RKNTRDFADEVEAI 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL7ANP_511063.1 SNU13 18..271 CDD:455736 48/229 (21%)
Rpp38XP_030105367.1 Ribosomal_L7Ae 172..250 CDD:426153 17/81 (21%)

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