DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL7A and Y48A6B.3

DIOPT Version :9

Sequence 1:NP_001284944.1 Gene:RpL7A / 31588 FlyBaseID:FBgn0014026 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_499415.1 Gene:Y48A6B.3 / 176531 WormBaseID:WBGene00012964 Length:163 Species:Caenorhabditis elegans


Alignment Length:125 Identity:29/125 - (23%)
Similarity:60/125 - (48%) Gaps:15/125 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 SPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNT-------VTKLIEQKKAQLVVIAHDVDP 168
            :|:|:.|..:|:|:     |..:..||   .|||..|       |.|.:.:.:..:.::|.:|.|
 Worm    40 NPIAQPLANRKLAK-----KVYKLIKK---ASAGDKTLREGIKDVQKELRRNEKGICILAGNVSP 96

  Fly   169 LELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVK 228
            :::...:|.:|.:..:||..:..:.:||..|..:..:.|.......:.|..:.:|.||::
 Worm    97 IDVYSHIPGICEEKEIPYVYIPSREQLGLAVGHRRPSILIFVKPSGDFKELYDEVAEALR 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL7ANP_001284944.1 PTZ00365 18..271 CDD:240382 29/125 (23%)
Ribosomal_L7Ae 37..257 CDD:294400 29/125 (23%)
Y48A6B.3NP_499415.1 Ribosomal_L7Ae 53..148 CDD:279573 21/102 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1358
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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