DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spat and agxt

DIOPT Version :9

Sequence 1:NP_511062.1 Gene:Spat / 31587 FlyBaseID:FBgn0014031 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001006705.1 Gene:agxt / 448338 XenbaseID:XB-GENE-950839 Length:391 Species:Xenopus tropicalis


Alignment Length:379 Identity:181/379 - (47%)
Similarity:250/379 - (65%) Gaps:1/379 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VPPPLVLKRPLYVPSKTLMGPGPSNCSHRVLEAMSNPVLGHMHPECLQIMDEVKEGIKYIFQTLN 67
            :|||..|.:||.||.:.::||||||...|:..|.:..::||||||..||||::|:||:|.|||.|
 Frog     7 IPPPSALLQPLNVPQRLMLGPGPSNVPPRIQAAGALQLIGHMHPEMFQIMDDIKQGIRYAFQTQN 71

  Fly    68 DATMCISGAGHSGMEAALCNLIEDGDVVLMGITGVWGHRAGDMARRYGAEVHYVEASFGRALSHE 132
            :.|:.:||:||..||.|:.|::|.|||||:.:.|:||.||||:|.|.||:|.||....|...:.:
 Frog    72 NLTLAVSGSGHCAMETAIFNVVEKGDVVLIAVKGIWGERAGDIAERIGADVRYVSKPVGEGFTLK 136

  Fly   133 EITFAFEAHRPKVFFIAQGDSSTGIIQQNIRELGELCRKYDCFLIVDTVASLGGTEFLMDEWKVD 197
            |:..|...|:|.:|||..|:||:|::|. :..||:||.:|:|.|:||:||||||....||:..:|
 Frog   137 EVEKALVEHKPSLFFITHGESSSGVVQP-LDGLGDLCHRYNCLLLVDSVASLGGAPIYMDKQGID 200

  Fly   198 VAYTGSQKSLGGPAGLTPISFSKRALTRIRKRKTKPKVYYFDILLIGQYWGCYGTPRIYHHTISS 262
            :.|:||||.|..|.|..|||||:.|..:|..|||||...|.|:..:..||||.|.|||||||...
 Frog   201 ILYSGSQKVLNAPPGTAPISFSETASKKIFSRKTKPPSLYVDLKWLANYWGCDGKPRIYHHTGPV 265

  Fly   263 TLLYGLREALAHFCAVGLKAVVRRHQECSKRLQLGIEELGLEMFVSREEERLPTVNTIKVPFGVD 327
            |..:.|||.||.....||:.....|||.:.:|..|:|.|||::||.....|||||.|:.||.|.:
 Frog   266 TNFFSLREGLAVLAEQGLERSWAVHQENALKLHKGLEALGLKLFVKDPALRLPTVTTVSVPNGYE 330

  Fly   328 WKKVAEYAMRKYSVEISGGLGPTVEHVFRIGLMGENATVERVDMVLSILNEAIQ 381
            |:.:..:.|:.:::||:|||||:...|.||||||.|:|...||.||..|.:|:|
 Frog   331 WRDITTFIMKNHAIEITGGLGPSTGKVLRIGLMGYNSTQANVDRVLEALRDALQ 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SpatNP_511062.1 PucG 16..389 CDD:223153 174/366 (48%)
AGAT_like 19..381 CDD:99744 172/361 (48%)
agxtNP_001006705.1 PucG 22..383 CDD:223153 171/361 (47%)
AGAT_like 23..384 CDD:99744 172/361 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 336 1.000 Domainoid score I1121
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H37251
Inparanoid 1 1.050 379 1.000 Inparanoid score I2024
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D289834at33208
OrthoFinder 1 1.000 - - FOG0003987
OrthoInspector 1 1.000 - - oto105055
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2022
SonicParanoid 1 1.000 - - X3850
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.090

Return to query results.
Submit another query.