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Protein Alignment CG3342 and GOLGA6A

DIOPT Version :9

Sequence 1:	NP_572324.1	Gene:	CG3342 / 31586	FlyBaseID:	FBgn0029874	Length:	453	Species:	Drosophila melanogaster
Sequence 2:	NP_001033729.2	Gene:	GOLGA6A / 342096	HGNCID:	13567	Length:	693	Species:	Homo sapiens

Alignment Length:	462	Identity:	86/462 - (18%)
Similarity:	159/462 - (34%)	Gaps:	86/462 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly     6 DQSYQDFFDKLRSESGPRNLRQIFEDDDRPLANESSSLRYQPGSSKKLQAGKRPA-MTRSS---- 65
            |..||:....|  ||....:.|:.|:.: .|..:...:.:|...:||.......| |.|..
Human    68 DSQYQELAVAL--ESSSVTISQLNENIE-SLKQQKKQVEHQLEEAKKTNNEIHKAQMERLETINI 129

  Fly    66 -TQETGDSPPAAWNTAIAKVVHAYRSSENVGRVGLALSILGEMEASKLIVYRSKSQVLTTLQLTP 129
             |.|..|.....::|..|.......|.:..||:..:|..:.|:|       |:...|.|..|...
Human   130 LTLEKADLKTTLYHTKRAARHFEEESKDLAGRLQYSLQRIQELE-------RALCAVSTQQQEED 187

  Fly   130 RGGKVILRESYLQFYDDEQRFWSLRFDKEPDEKEFITFMVKNKLPVEHYLSEISSS--------- 185
            |...  .||:.||                    .::...:|.:..:..::::::.|
Human   188 RSSS--CREAVLQ--------------------RWLQQTIKERALLNAHVTQVTESLKQVQLERD 230

  Fly   186 -------SSASPSREDLSKIRTKATVTKTTPNPPQPQPRSRVTLPTLEKADDEERERETETPSNE 243
                   ...:..:|.:.|:..:|...|      :.:.|....:..||::..|.:.:..|.||..
Human   231 EYAKHIKGERARWQERMWKMSVEARTLK------EEKKRDIHRIQELERSLSELKNQMAEPPSLA 289

  Fly   244 DVIVTPVPRPIGSSNAHRKLSASSLAVANASTSSDTPLAVTTLDKYLDEQRASGALMEHKMDAIL 308
            ...||.|...:.....|.:.....|. ....:..:...|::.|.|   ||:..           |
Human   290 PPAVTSVVEQLQDEAKHLRQEVEGLE-GKLQSQVENNQALSLLSK---EQKQR-----------L 339

  Fly   309 QAMNRMGGQSSVAPKKPSDPLLERDSEDEMLELEQKLL-----NLKRENRALMR---NLKAREQA 365
            |....|..:......:..:.|.|   ::|.|..:||.|     .|:::.:.|.:   .|:..|:.
Human   340 QEQEEMLREQEAQRVREQERLCE---QNERLREQQKTLQEQGERLRKQEQRLRKQEERLRKEEER 401

  Fly   366 LEDLRCSACALCEELLVQNGELKSQNAQLLLASQHISDSSTAASPAHCRNCESSSRQIAKMQLHI 430
            |:..........|.|..:...|:.|..:|.|:..|..|...|.......:..:..:...:::..:
Human   402 LQKQEKRLWDQEERLWKKEERLQKQEERLALSQNHKLDKQLAEPQCSFEDLNNEKKSALQLEQQV 466

  Fly   431 SALQEAL 437
            ..|||.|
Human   467 KELQEKL 473

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.