DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3342 and GOLGA8A

DIOPT Version :9

Sequence 1:NP_572324.1 Gene:CG3342 / 31586 FlyBaseID:FBgn0029874 Length:453 Species:Drosophila melanogaster
Sequence 2:NP_001373822.1 Gene:GOLGA8A / 23015 HGNCID:31972 Length:603 Species:Homo sapiens


Alignment Length:492 Identity:92/492 - (18%)
Similarity:159/492 - (32%) Gaps:168/492 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 NLRQI----FEDDDRPLANESSSLRYQPGSSKKLQAGKRPA-------MTRSSTQETGDSPPAAW 77
            |.|.|    ..|..:.|..:...:.:|....||....|:.|       :.|.:|::      ...
Human    79 NSRSIKISRLNDTIKSLKQQKKQVEHQLEEEKKANNEKQKAERELEGQIQRLNTEK------KKL 137

  Fly    78 NTAIAKVVHAYR-----SSENVGRVGLALSILGEMEASKLIV----------YRSKSQVLTTLQL 127
            ||.:..:.|:.|     |.:..||:..:...:||:|.|...|          :.|:|:.|...||
Human   138 NTDLYHMKHSLRYFEEESKDLAGRLQRSSQRIGELEWSLCAVAATQKKKPDGFSSRSKALLKRQL 202

  Fly   128 TPRGGKVIL------------------RESYLQFYDDEQRFWSLRFDKEPDEKEFITFMVKNKLP 174
            .....:.||                  |:.|.:....|:..|..|..|...|   :..:.:.|..
Human   203 EQSIREQILLKGHVTQLKESLKEVQLERDQYAEQIKGERAQWQQRMRKMSQE---VCTLKEEKKH 264

  Fly   175 VEHYLSEISSSSSASPSREDLSKIRTKATVTKTTPNPPQ-PQPRSRVTLPTLEKADDEERERETE 238
            ..|.:.|:..|         ||:::.:    ...|.||. |...|.|.|..|.|           
Human   265 DTHRVEELERS---------LSRLKNQ----MAEPLPPDAPAVSSEVELQDLRK----------- 305

  Fly   239 TPSNEDVIVTPVPRPIGSSNAHRKLSASSLAVANASTSSDTPLAVTTLDKYLDEQRASGALM-EH 302
                                                                :.:|.:|.|. :.
Human   306 ----------------------------------------------------ELERVAGELQAQV 318

  Fly   303 KMDAILQAMNRMGGQSSVAPKKPSDPLLERDSEDEMLELEQKLLNLKRENRALMRNLKAREQALE 367
            :.:..:..:||  ||....          |:.|:.:.|.:::|    ||....::.|...:..||
Human   319 ENNQCISLLNR--GQKERL----------REQEERLQEQQERL----REREKRLQQLAEPQSDLE 367

  Fly   368 DLRC-SACALCEELLVQNGELKSQNAQLLLASQHISDSSTAASPAHCRNCESSS-----RQIAKM 426
            :|:. :..||  :|..|..||:.:..|::...........||.||.....|||.     .:.|.:
Human   368 ELKHENKSAL--QLEQQVKELQEKLGQVMETLTSAEKEPEAAVPASGTGGESSGLMDLLEEKADL 430

  Fly   427 QLHISAL-------------QEALRIFQKSGDSSSSS 450
            :.|:..|             |:..|:..:.|||:..:
Human   431 REHVEKLELGFIQYRRERCHQKVHRLLTEPGDSAKDA 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3342NP_572324.1 None
GOLGA8ANP_001373822.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..82 1/2 (50%)
SMC_prok_B 78..>439 CDD:274008 87/462 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..125 6/29 (21%)
GOLGA2L5 218..>397 CDD:405716 46/275 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 398..419 6/20 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 460..492 3/8 (38%)
Golgi-targeting domain 491..603
GM130_C 558..603 CDD:408816
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4725
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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