DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3342 and golg-2

DIOPT Version :9

Sequence 1:NP_572324.1 Gene:CG3342 / 31586 FlyBaseID:FBgn0029874 Length:453 Species:Drosophila melanogaster
Sequence 2:NP_494929.3 Gene:golg-2 / 173870 WormBaseID:WBGene00018017 Length:928 Species:Caenorhabditis elegans


Alignment Length:510 Identity:103/510 - (20%)
Similarity:192/510 - (37%) Gaps:127/510 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EIGNDQSYQDFFDKLRSESGP----RNLRQIFEDDDRPLAN---ESSSLRYQPGSSKKLQAGKRP 59
            ::..|...:|.:.|....:||    .|....:|:..|.|.|   |.|.|..:..:.|...|.:..
 Worm   258 QLMKDIQMKDLYLKQLGATGPPGGIPNENTNYENLQRELENVKAEKSRLLVESATLKAHYADREY 322

  Fly    60 AMTRSSTQETGDSPPAAWNTAIAKVVH----AYRSSENVGRVGLALSILGEMEASKLIVYRSKSQ 120
            |:.:...:            ...::.|    .:.|::.|..:...|.| .:.|..||.:....|:
 Worm   323 ALQQKQAE------------MALEIEHLHNQKFSSNDQVEHLENQLEI-AQSELQKLQMNMDVSE 374

  Fly   121 ------VLTTLQLTPRGGKVILRES-------YLQFYDDEQRFWSLRFDKEPDEKEFITF----- 167
                  .:|...:..|     :||:       :.:..:|:|:    |.::|..||:.:.|     
 Worm   375 RHDEIPTITEEDVARR-----IREACFVERGKWERRSEDDQK----RREEEILEKDKVIFEREQS 430

  Fly   168 ----MVKNKLPVEHYLSEISSSSSASPSREDLSKIRTKATVTKTTPNPPQPQPRSRVTLPTLEKA 228
                .:|.:|..|..|...::.:......|.|.  ..||||::....                  
 Worm   431 LAELEMKYRLLEERTLESTANGADLLSLSEQLQ--NEKATVSRAVAQ------------------ 475

  Fly   229 DDEERERETETPSNEDVIVTPVPRPIGSSNAHRKLSASSLAVANASTSSDTPLAVTTLDKYLDEQ 293
            :.|.:||..||   ||..||              |:.....|..|..|::.  .|..|.|.|:.:
 Worm   476 NKELKERLLET---EDRFVT--------------LTKEKADVELAKQSAEH--QVRELTKQLNLE 521

  Fly   294 RASGALMEHKMDAILQAMNRMGGQSSVAPKKPSDPLLERDSEDEML----ELEQKLLNLKRENRA 354
            .|  .|:.:..:.|.:..:....|.|.|.::      :|:...|::    ||::.:..|:|||..
 Worm   522 TA--GLVGNLSEVIARQPHLEASQESAASQE------QREESQEIVKLNEELKENISTLQRENAE 578

  Fly   355 LMRNLKAREQALE----DLRCSAC--ALCEELLVQNGELKSQNA---QLLLASQHISD--SSTAA 408
            :..:|:.:...|:    |||.|..  ...:|::.||.|.::||:   :|..|...:.|  :...|
 Worm   579 IRSDLELKTHELQLVRADLRRSNTHNEQMDEIMRQNAEDENQNSIHVELTQAVGRVQDLHAENEA 643

  Fly   409 SPAHCRNC------ESSSRQIAKMQLHISALQEALRIFQ----KSGDSSSSSGRL 453
            ......||      |.:.|:..:.:..:.:.||.|.:.:    :..::..||..|
 Worm   644 LREAFNNCRQQLEDERADRRAEEERKDLESKQEQLELKETKVPEEAENQQSSREL 698

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3342NP_572324.1 None
golg-2NP_494929.3 GOLGA2L5 435..790 CDD:291729 67/311 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4725
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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