DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3918 and CXIP4

DIOPT Version :9

Sequence 1:NP_572323.1 Gene:CG3918 / 31585 FlyBaseID:FBgn0029873 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001323648.1 Gene:CXIP4 / 817440 AraportID:AT2G28910 Length:332 Species:Arabidopsis thaliana


Alignment Length:297 Identity:75/297 - (25%)
Similarity:124/297 - (41%) Gaps:63/297 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NKDTLRAACKKCGYAGHLTYQCRNFLKVDPNKE---------ILL------------DVESTSSD 52
            |.|..|.:|||||..||||:||||||....:||         :|.            :||..||:
plant    75 NNDEARGSCKKCGRVGHLTFQCRNFLSTKEDKEKDPGAIEAAVLSGLEKIRRGVGKGEVEEVSSE 139

  Fly    53 SELDYLTPLTELRAQELKSGAEVPPPTEPAVLPAAGKRDRSKDKSRDRLKAKKREREREREKVKE 117
            .|           .:...|.::|....|..:....||:.......:.....||::|..:.   .:
plant   140 EE-----------EESESSDSDVDSEMERIIAERFGKKKGGSSVKKTSSVRKKKKRVSDE---SD 190

  Fly   118 KEKEKGSRSKDKKRSHSKSSHK---LAEKSKDKKSVRHKKHGKKRSRKHKKTTNTNNSSSNSSSE 179
            .:.:.|.|.:.::....:||||   |:| |:|::..|.|:..::|.|  |:..:.::.|.:....
plant   191 SDSDSGDRKRRRRSMKKRSSHKRRSLSE-SEDEEEGRSKRRKERRGR--KRDEDDSDESEDEDDR 252

  Fly   180 LAKTKTGKRPSSGSTNKKSKRRRSSSTSSSDSSSSSSSSSSSSSSTSSSSSSSSDDSSDDSSTSS 244
            ..|.|          ::|.||||.|..:.||.|.|.||.........:..::|||          
plant   253 RVKRK----------SRKEKRRRRSRRNHSDDSDSESSEDDRRQKRRNKVAASSD---------- 297

  Fly   245 DSSESDSSDNEESSTSESDEYGRKKKRQGKYKRKSTD 281
              ||::.|.::.|..........:||.:.::.||..:
plant   298 --SEANVSGDDVSRVGRGSSKRSEKKSRKRHHRKERE 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3918NP_572323.1 None
CXIP4NP_001323648.1 zf-CCHC_3 79..>98 CDD:290628 12/18 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2985
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 89 1.000 Inparanoid score I2294
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005747
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR31437
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
55.010

Return to query results.
Submit another query.