DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpV and PpD3

DIOPT Version :9

Sequence 1:NP_001259272.1 Gene:PpV / 31582 FlyBaseID:FBgn0003139 Length:303 Species:Drosophila melanogaster
Sequence 2:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster


Alignment Length:310 Identity:118/310 - (38%)
Similarity:173/310 - (55%) Gaps:31/310 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IEDVKKCKYLPENE-----LKKLCE---------------MVCDI---LLEETNILPVSTP---- 45
            |||..|...|.:.:     :|:|.|               ::|:|   :..:.:::.::.|    
  Fly   194 IEDDYKGPQLEDGKVTLKFMKELMEHYKAQKRLHRKFAYKILCEIDTYMRAQPSLVDITVPDEEK 258

  Fly    46 VTVCGDIHGQFYDLEQLFRTGGQVPHTN-YIFMGDFVDRGYYSLETFTRLLTLKARYPSRITLLR 109
            .|:|||||||||||..:|...|.....| |:|.|||||||.:|:|....|...|..||:...|.|
  Fly   259 FTICGDIHGQFYDLMNIFEINGLPSEKNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFLAR 323

  Fly   110 GNHETRQITKVYGFFDECFSKYGNANGWKYCCKVFDLLTIAAIIDEEVLCVHGGL-SPEIITLDQ 173
            ||||:..:.::|||..|..:||.:|.. ....:||:.|.:...|::::|.:|||| |.|.:|||.
  Fly   324 GNHESINMNQMYGFTGEVTAKYTSAMA-DIFTQVFNWLPLCHCINQKILVMHGGLFSTEDVTLDH 387

  Fly   174 IRTIDRNGEIPYKGAFCDLVWSDPEDMEYWGQSPRGAGWLFGHNVTKDFMAINNLNLICRAHQLV 238
            ||.|:||.:.|.:|..|:|:||||:.....|||.||.|..||.:||:.|...|||:.|.|:|::.
  Fly   388 IRRIERNCQPPEEGLMCELLWSDPQQWMGLGQSKRGVGIQFGPDVTEKFCKDNNLDYIIRSHEVK 452

  Fly   239 NEGIKYMFDGKLVTVWSAPNYCYRCGNVAAILSFETAE-KRQTKIFLAVP 287
            :.|.:...:||.:||:||||||...||:.|.::..... |...|.|.|||
  Fly   453 DMGYEVAHNGKCITVFSAPNYCDTMGNMGAFITITGNNLKPNYKSFEAVP 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpVNP_001259272.1 PTZ00239 3..303 CDD:173488 118/310 (38%)
MPP_PP2A_PP4_PP6 3..287 CDD:277360 116/308 (38%)
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150
TPR_1 49..81 CDD:278916
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
MPP_PP5_C 198..513 CDD:277362 115/306 (38%)
PP2Ac 226..502 CDD:197547 108/276 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438829
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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