DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpV and ppp5c

DIOPT Version :9

Sequence 1:NP_001259272.1 Gene:PpV / 31582 FlyBaseID:FBgn0003139 Length:303 Species:Drosophila melanogaster
Sequence 2:NP_001007891.1 Gene:ppp5c / 493275 XenbaseID:XB-GENE-982044 Length:493 Species:Xenopus tropicalis


Alignment Length:284 Identity:118/284 - (41%)
Similarity:168/284 - (59%) Gaps:17/284 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KKCKYLPENELKKLCEMVCDILLEETNILPV----STPVTVCGDIHGQFYDLEQLFRTGGQVPHT 72
            :||.|       ::...|.|||.:..:::.:    |..||||||.|||||||..:|...| :|..
 Frog   200 RKCVY-------QMLVQVKDILSKLPSLVEISLEKSQQVTVCGDTHGQFYDLMNIFHLNG-LPSE 256

  Fly    73 N--YIFMGDFVDRGYYSLETFTRLLTLKARYPSRITLLRGNHETRQITKVYGFFDECFSKYGNAN 135
            |  |||.|||||||.:|:|....|...|..||::..||||||||..:.::|||..|..:|| :|.
 Frog   257 NNPYIFNGDFVDRGSFSVEVIVTLFGFKLLYPAQFHLLRGNHETDTMNQMYGFEGEVKAKY-SAQ 320

  Fly   136 GWKYCCKVFDLLTIAAIIDEEVLCVHGGL-SPEIITLDQIRTIDRNGEIPYKGAFCDLVWSDPED 199
            .::...:||..|.:|..:::.||.:|||| |.:.:||||||:|:||.:.|..|..|||:||||:.
 Frog   321 MFQLFSEVFQWLPLAMCVNQRVLIMHGGLFSEDGVTLDQIRSIERNRQPPDSGPMCDLLWSDPQP 385

  Fly   200 MEYWGQSPRGAGWLFGHNVTKDFMAINNLNLICRAHQLVNEGIKYMFDGKLVTVWSAPNYCYRCG 264
            .:....|.||....||.:||:.|:..|.|:.|.|:|::..||.:...:|..|||:||||||.:.|
 Frog   386 QDGRSSSKRGVSCQFGPDVTRRFLEENGLDYIIRSHEVKPEGYEVSHNGLCVTVFSAPNYCDQMG 450

  Fly   265 NVAAILSFETAE-KRQTKIFLAVP 287
            |..|.:....:: |.:...|.|||
 Frog   451 NKGAYIHLNGSDLKPKFHQFEAVP 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpVNP_001259272.1 PTZ00239 3..303 CDD:173488 118/284 (42%)
MPP_PP2A_PP4_PP6 3..287 CDD:277360 116/282 (41%)
ppp5cNP_001007891.1 PLN03088 22..>232 CDD:330826 8/38 (21%)
TPR repeat 22..50 CDD:276809
TPR repeat 55..85 CDD:276809
TPR repeat 90..118 CDD:276809
MPP_PP5_C 170..485 CDD:277362 118/284 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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