DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PpV and ppp1cc

DIOPT Version :9

Sequence 1:NP_001259272.1 Gene:PpV / 31582 FlyBaseID:FBgn0003139 Length:303 Species:Drosophila melanogaster
Sequence 2:NP_998835.1 Gene:ppp1cc / 407879 XenbaseID:XB-GENE-967934 Length:323 Species:Xenopus tropicalis


Alignment Length:321 Identity:135/321 - (42%)
Similarity:192/321 - (59%) Gaps:26/321 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGDVDKW--------IEDVKKCK-----YLPENELKKLCEMVCDILLEETNILPVSTPVTVCGDI 52
            |.||||.        :.:|:..|     .|.|||::.||....:|.|.:..:|.:..|:.:||||
 Frog     1 MADVDKLNIDSIIQRLLEVRGSKPGKNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDI 65

  Fly    53 HGQFYDLEQLFRTGGQVPHTNYIFMGDFVDRGYYSLETFTRLLTLKARYPSRITLLRGNHETRQI 117
            |||:|||.:||..||..|.:||:|:||:||||..||||...||..|.:||....|||||||...|
 Frog    66 HGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASI 130

  Fly   118 TKVYGFFDECFSKYGNANGWKYCCKVFDLLTIAAIIDEEVLCVHGGLSPEIITLDQIRTIDRNGE 182
            .::|||:|||..:| |...||.....|:.|.||||:||::.|.||||||::.:::|||.|.|..:
 Frog   131 NRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTD 194

  Fly   183 IPYKGAFCDLVWSDPE-DMEYWGQSPRGAGWLFGHNVTKDFMAINNLNLICRAHQLVNEGIKYMF 246
            :|.:|..|||:||||: |:..||::.||..:.||..|...|:..::|:|||||||:|.:|.::..
 Frog   195 VPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFA 259

  Fly   247 DGKLVTVWSAPNYCYRCGNVAAILS-----------FETAEKRQTKIFLAVPDAERVIPKQ 296
            ..:|||::||||||....|..|::|           .:.|||::......|.....:|.||
 Frog   260 KRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKKPNASRPVTPPRGMITKQ 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpVNP_001259272.1 PTZ00239 3..303 CDD:173488 134/319 (42%)
MPP_PP2A_PP4_PP6 3..287 CDD:277360 130/308 (42%)
ppp1ccNP_998835.1 MPP_PP1_PPKL 8..298 CDD:277359 123/290 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 300..323 6/21 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.