DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpV and Ppef1

DIOPT Version :10

Sequence 1:NP_511061.1 Gene:PpV / 31582 FlyBaseID:FBgn0003139 Length:303 Species:Drosophila melanogaster
Sequence 2:NP_001421152.1 Gene:Ppef1 / 317498 RGDID:1562772 Length:664 Species:Rattus norvegicus


Alignment Length:297 Identity:95/297 - (31%)
Similarity:138/297 - (46%) Gaps:51/297 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VCDILLEETNILP-------VST----PVTVCGDIHGQFYDLEQLFRTGGQVPHTN-YIFMGDFV 81
            |.::|.|...||.       :.|    .:|:|||:||:..||..:|...|.....| |:|.||||
  Rat   164 VLEVLFEARKILKQMPNFTRIQTFPAKEITICGDLHGKLDDLMLIFYKNGLPSEKNPYVFNGDFV 228

  Fly    82 DRGYYSLETFTRLLTLKARYPSRITLLRGNHETRQITKVYGFFDECFSKYGNANGWKYCCKVFDL 146
            |||..|:|....||.....||:.:.|.|||||...:...|||..|...|| ..:|.|....:.:|
  Rat   229 DRGNNSMEILMILLVSFLVYPTDLHLNRGNHEDFMMNLRYGFTKEILQKY-KLHGKKILQVLEEL 292

  Fly   147 LT---IAAIIDEEVLCVHGGL--SPEIITLDQIR------------------TIDRNGEIPYKGA 188
            .|   |..|||.|:|.:|||:  |.::..|.|::                  .|.:|...|.:.:
  Rat   293 YTWLPIGTIIDNEILVIHGGISESTDLNILQQLQRNKMKSVLMPPMSTNQECNIKKNKAGPSEQS 357

  Fly   189 ------------FCDLVWSDPEDME-YWGQSPRGAGWLFGHNVTKDFMAINNLNLICRAHQLVNE 240
                        ..||:||||...: .:..:.||.|..||.:||...:..|.|.::.|:|:...:
  Rat   358 ASEQLTKLEWEQIIDLLWSDPRGKKGCYPNTSRGGGCYFGPDVTSKVLNKNQLKMVIRSHECKPD 422

  Fly   241 GIKYMFDGKLVTVWSAPNYCYRCGNVAAI--LSFETA 275
            |.:...|||::||:||.||.....|..|.  ||:.|:
  Rat   423 GYEICHDGKVITVFSASNYYEEGSNRGAYIRLSYGTS 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpVNP_511061.1 MPP_PP2A_PP4_PP6 3..287 CDD:277360 95/297 (32%)
Ppef1NP_001421152.1 IQ 40..>57 CDD:197470
MPP_RdgC 140..466 CDD:277364 95/297 (32%)
FRQ1 498..660 CDD:444056
Blue background indicates that the domain is not in the aligned region.

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