DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PpV and Ppef2

DIOPT Version :10

Sequence 1:NP_511061.1 Gene:PpV / 31582 FlyBaseID:FBgn0003139 Length:303 Species:Drosophila melanogaster
Sequence 2:XP_030110066.1 Gene:Ppef2 / 19023 MGIID:1342304 Length:797 Species:Mus musculus


Alignment Length:376 Identity:100/376 - (26%)
Similarity:135/376 - (35%) Gaps:146/376 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LLEET--------NILPVST----PVTVCGDIHGQFYDLEQLF-RTGGQVPHTNYIFMGDFVDRG 84
            ||.||        ||..|||    .||||||:|||..||..:| :.|...|...|:|.|||||||
Mouse   189 LLYETRKHLAQLPNINRVSTCYSEEVTVCGDLHGQLDDLIFIFYKNGLPSPERAYVFNGDFVDRG 253

  Fly    85 YYSLETFTRLLTLKARYPSRITLLRGNHETRQITKVYGFFDECFSKYGNANGWKY---CCKVFDL 146
            ..|:|....|......||....|.|||||...:...|||..|...|| ..:|.|.   ...||..
Mouse   254 KDSVEVLMVLFAFMLVYPKEFHLNRGNHEDHLVNLRYGFTKEVMHKY-KIHGKKILRTLQDVFCW 317

  Fly   147 LTIAAIIDEEVLCVHGGLSPEIITLDQIRTIDR-----------------------------NGE 182
            |.:|.::||:||.:|||:|.: ..|:.:..:||                             :|:
Mouse   318 LPLATLVDEKVLVLHGGVSDK-TDLELLAKLDRHKIVSTMRCKTRKESENREEQKRKDNQTSSGQ 381

  Fly   183 IP------------------------YK-GAFC-------------------------------- 190
            .|                        || |..|                                
Mouse   382 KPTPWFLPQSRSLPSSPFHLGSGFKAYKAGRSCSIPCGSPNSKELSRRGQVRRSVDLELEQCRQQ 446

  Fly   191 ----------------------------------------DLVWSDPEDME-YWGQSPRGAGWLF 214
                                                    |::||||...| ....:.||.|..|
Mouse   447 AGFLGIREKGESLPLAPDADCVADGGGVLEPTPEEWKQVVDILWSDPAAQEGCKANAVRGGGCYF 511

  Fly   215 GHNVTKDFMAINNLNLICRAHQLVNEGIKYMFDGKLVTVWSAPNYCYRCGN 265
            |.:||:..|....|.|:.|:|:...||.::..:.|::|::||.|| |..|:
Mouse   512 GPDVTERLMEKYKLQLLIRSHECKPEGYEFCHNRKVLTIFSASNY-YEVGS 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpVNP_511061.1 MPP_PP2A_PP4_PP6 3..287 CDD:277360 100/376 (27%)
Ppef2XP_030110066.1 IQCD <61..82 CDD:467745
MPP_RdgC 162..581 CDD:277364 100/376 (27%)
FRQ1 621..766 CDD:444056
EFh 701..766 CDD:238008
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.