DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpV and C24H11.1

DIOPT Version :9

Sequence 1:NP_001259272.1 Gene:PpV / 31582 FlyBaseID:FBgn0003139 Length:303 Species:Drosophila melanogaster
Sequence 2:NP_499527.1 Gene:C24H11.1 / 182859 WormBaseID:WBGene00007699 Length:384 Species:Caenorhabditis elegans


Alignment Length:244 Identity:90/244 - (36%)
Similarity:136/244 - (55%) Gaps:17/244 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 ILPVSTPVTVCGDIHGQFYDLEQLFRTGGQVPHTNYIFMGDFVDRGYYSLETFTRLLTLKARYPS 103
            :|.:..|:.:|||.|||:.||.::|...|....|.|:|:||:||||.:|||....|.:||...|.
 Worm   107 LLELQAPINICGDTHGQYNDLLRIFNACGAATKTQYLFLGDYVDRGGHSLEVIMLLFSLKLAMPR 171

  Fly   104 RITLLRGNHETRQITKVYGFFDECFSKYGN----ANGWKYCCKVFDLLTIAAIIDEEVLCVHGGL 164
            ::.|||||||.:.|.|.|||..|...::..    .:.:.:..:||..:.:.||:.:.:||:|||:
 Worm   172 KMHLLRGNHELKAINKNYGFHAELKKRFQREEVYESVYNHFNQVFSYMPLCAIVSKRILCMHGGI 236

  Fly   165 SPEIITLDQIRTIDRNGEIPYKGA-----FCDLVWSDPEDMEYWGQSP---RGAGWLFGHNVTKD 221
            ||.:.:||.||.|    .:|.:.|     .|||:|:||| .:..|..|   |....:||.....|
 Worm   237 SPHLKSLDDIRAI----PLPLETAKTHPLACDLLWADPE-KDAKGFEPNKIRAISNVFGKKEVDD 296

  Fly   222 FMAINNLNLICRAHQLVNEGIKYMFDGKLVTVWSAPNYCYRCGNVAAIL 270
            .....:::||.||||:|..|..:..|.:|:||:||..|.....|.||::
 Worm   297 LCKRLDIDLIVRAHQVVEYGYAFFADRRLITVFSASRYQIELCNYAAVV 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpVNP_001259272.1 PTZ00239 3..303 CDD:173488 90/244 (37%)
MPP_PP2A_PP4_PP6 3..287 CDD:277360 90/244 (37%)
C24H11.1NP_499527.1 MPP_superfamily 43..360 CDD:301300 90/244 (37%)
PP2Ac 106..360 CDD:197547 90/244 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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