DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpV and gsp-1

DIOPT Version :9

Sequence 1:NP_001259272.1 Gene:PpV / 31582 FlyBaseID:FBgn0003139 Length:303 Species:Drosophila melanogaster
Sequence 2:NP_001256250.1 Gene:gsp-1 / 179486 WormBaseID:WBGene00001747 Length:329 Species:Caenorhabditis elegans


Alignment Length:283 Identity:120/283 - (42%)
Similarity:177/283 - (62%) Gaps:12/283 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GD--VDKWIE---DVKKCK-----YLPENELKKLCEMVCDILLEETNILPVSTPVTVCGDIHGQF 56
            ||  :|..|.   :|:.|:     .:.|.|::.||....:|.|.:..:|.:..|:.:|||||||:
 Worm     5 GDLNIDNLITRLLEVRGCRPGKPVTMSEAEIRALCHKSREIFLSQPILLELEAPLKICGDIHGQY 69

  Fly    57 YDLEQLFRTGGQVPHTNYIFMGDFVDRGYYSLETFTRLLTLKARYPSRITLLRGNHETRQITKVY 121
            .||.:||..||..|..||:|:||:||||..||||...||..|.:||....|||||||...|.::|
 Worm    70 NDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKVKYPENFFLLRGNHECASINRIY 134

  Fly   122 GFFDECFSKYGNANGWKYCCKVFDLLTIAAIIDEEVLCVHGGLSPEIITLDQIRTIDRNGEIPYK 186
            ||:|||..:: :...||.....|:.|.|||:|||::.|.||||||::..::|||.:.|..::|..
 Worm   135 GFYDECKRRF-SIKLWKTFTDCFNCLPIAALIDEKIFCCHGGLSPDLQNMEQIRRVMRPTDVPDT 198

  Fly   187 GAFCDLVWSDPE-DMEYWGQSPRGAGWLFGHNVTKDFMAINNLNLICRAHQLVNEGIKYMFDGKL 250
            |..|||:||||: |:..||::.||..:.||.:|...|:..::|:|||||||:|.:|.::....:|
 Worm   199 GLLCDLLWSDPDKDVTGWGENDRGVSFTFGPDVVAKFLNRHDLDLICRAHQVVEDGYEFFAKRQL 263

  Fly   251 VTVWSAPNYCYRCGNVAAILSFE 273
            ||::||||||....|...::|.:
 Worm   264 VTLFSAPNYCGEFDNAGGMMSVD 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpVNP_001259272.1 PTZ00239 3..303 CDD:173488 119/282 (42%)
MPP_PP2A_PP4_PP6 3..287 CDD:277360 119/282 (42%)
gsp-1NP_001256250.1 MPP_PP1_PPKL 8..298 CDD:277359 118/280 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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