DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpV and let-92

DIOPT Version :9

Sequence 1:NP_001259272.1 Gene:PpV / 31582 FlyBaseID:FBgn0003139 Length:303 Species:Drosophila melanogaster
Sequence 2:NP_001369970.1 Gene:let-92 / 178117 WormBaseID:WBGene00002363 Length:318 Species:Caenorhabditis elegans


Alignment Length:312 Identity:167/312 - (53%)
Similarity:214/312 - (68%) Gaps:22/312 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DVDKWIEDVKKCKYLPENELKKLCEMVCDILLEETNILPVSTPVTVCGDIHGQFYDLEQLFRTGG 67
            |||:|||.:.:||.|.||::|.|||...:||.:|.|:..|..|||||||:||||:||.:||:.||
 Worm    18 DVDQWIEQLYECKPLSENQVKTLCEKAKEILEKEPNVQEVRCPVTVCGDVHGQFHDLMELFKMGG 82

  Fly    68 QVPHTNYIFMGDFVDRGYYSLETFTRLLTLKARYPSRITLLRGNHETRQITKVYGFFDECFSKYG 132
            :.|.|||:||||:|||||||:||.:.|:.||.||..|:||||||||:||||:||||:|||..|||
 Worm    83 KSPDTNYLFMGDYVDRGYYSVETVSLLVCLKIRYKDRVTLLRGNHESRQITQVYGFYDECLRKYG 147

  Fly   133 NANGWKYCCKVFDLLTIAAIIDEEVLCVHGGLSPEIITLDQIRTIDRNGEIPYKGAFCDLVWSDP 197
            |:|.|||...:||...:.|::|.::.|:||||||.|.|||.||.:||..|:|::|..|||:||||
 Worm   148 NSNVWKYFTDLFDCFPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRIQEVPHEGPMCDLLWSDP 212

  Fly   198 EDMEYWGQSPRGAGWLFGHNVTKDFMAINNLNLICRAHQLVNEGIKYMFDGKLVTVWSAPNYCYR 262
            :|...||.||||||:.||.::::.|...|.|.||.||||||.||..:..|..:|||:||||||||
 Worm   213 DDRGGWGISPRGAGYTFGQDISETFNHSNGLTLISRAHQLVMEGYNWSHDRNVVTVFSAPNYCYR 277

  Fly   263 CGNVAAI-----------LSFETAEKRQTKIFLAVPDAERVIPKQNTTPYFL 303
            |||.||:           |.|:.|.:|      ..|...|     .|..|||
 Worm   278 CGNQAAMVELDDDLKYSFLQFDPAPRR------GEPHVTR-----RTPDYFL 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpVNP_001259272.1 PTZ00239 3..303 CDD:173488 165/310 (53%)
MPP_PP2A_PP4_PP6 3..287 CDD:277360 161/294 (55%)
let-92NP_001369970.1 MPP_PP2A_PP4_PP6 18..302 CDD:277360 159/283 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 1 1.010 - - D349967at33208
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.830

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