DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpV and pef-1

DIOPT Version :9

Sequence 1:NP_001259272.1 Gene:PpV / 31582 FlyBaseID:FBgn0003139 Length:303 Species:Drosophila melanogaster
Sequence 2:NP_741091.1 Gene:pef-1 / 175257 WormBaseID:WBGene00003969 Length:707 Species:Caenorhabditis elegans


Alignment Length:301 Identity:98/301 - (32%)
Similarity:144/301 - (47%) Gaps:35/301 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VDKWIEDVKKCKYL-PE------NELKKLCEMVCDILLEETNILPVSTPVTVCGDIHGQFYDL-E 60
            |.|.||..|..|.| |:      :|.:|:.:.:..:....|:|   |..||:|||:||:|.|| .
 Worm   205 VAKMIEAFKVNKVLHPKYVLMILHEARKIFKAMPSVSRISTSI---SNQVTICGDLHGKFDDLCI 266

  Fly    61 QLFRTGGQVPHTNYIFMGDFVDRGYYSLETFTRLLTLKARYPSRITLLRGNHETRQITKVYGFFD 125
            .|::.|.......|||.|||||||..|:|....|..|....|..|.|.|||||...:...|||..
 Worm   267 ILYKNGYPSVDNPYIFNGDFVDRGGQSIEVLCVLFALVIVDPMSIYLNRGNHEDHIMNLRYGFIK 331

  Fly   126 ECFSKYGNANG--WKYCCKVFDLLTIAAIIDEEVLCVHGGLS--PEIITLDQI----------RT 176
            |..:||.:.:.  .:....||..|.||.|||.::..||||:|  .|:..||:|          ..
 Worm   332 ELSTKYKDLSTPITRLLEDVFSWLPIATIIDRDIFVVHGGISDQTEVSKLDKIPRHRFQSVLRPP 396

  Fly   177 IDRNGEIPYKGA---------FCDLVWSDP-EDMEYWGQSPRGAGWLFGHNVTKDFMAINNLNLI 231
            :::..|...:.:         ..|::|||| ::...|....||.|..||.::|..|:..:...|:
 Worm   397 VNKGMESEKENSAVNVDEWKQMLDIMWSDPKQNKGCWPNVFRGGGSYFGADITASFLEKHGFRLL 461

  Fly   232 CRAHQLVNEGIKYMFDGKLVTVWSAPNYCYRCGNVAAILSF 272
            .|:|:...||.::..:...:||:||.||.....|..|.:.|
 Worm   462 VRSHECKFEGYEFSHNNTCLTVFSASNYYETGSNRGAYVKF 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpVNP_001259272.1 PTZ00239 3..303 CDD:173488 98/301 (33%)
MPP_PP2A_PP4_PP6 3..287 CDD:277360 98/301 (33%)
pef-1NP_741091.1 MPP_RdgC 199..515 CDD:277364 98/301 (33%)
PP2Ac 218..514 CDD:197547 92/288 (32%)
EFh 634..699 CDD:238008
EF-hand_7 634..698 CDD:290234
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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